RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 LONP1P36776 959 aaKnown RBP10.8□□□□□ -0.68
DDX39A-220ENST00000593008 JAK3P52333 1124 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 PRKCEQ02156 737 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 PPIGQ13427 754 aaKnown RBP eCLIP10.8□□□□□ -0.682e-10■■□□□ 11.9
DDX39A-220ENST00000593008 PLCB4Q15147 1175 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 EPHA7Q15375 998 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 TMEM119Q4V9L6 283 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 NAALADL2Q58DX5 795 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 MIS18BP1Q6P0N0 1132 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 Q7L0L9 218 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 TPH2Q8IWU9 490 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 GRAMD1CQ8IYS0 662 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 GPT2Q8TD30 523 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 PIGOQ8TEQ8 1089 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 CTAGE1Q96RT6 745 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 HSD17B14Q9BPX1 270 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.8□□□□□ -0.681e-7■□□□□ 8.5
DDX39A-220ENST00000593008 TUT1Q9H6E5 874 aaKnown RBP10.8□□□□□ -0.68
DDX39A-220ENST00000593008 POLD4Q9HCU8 107 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 ZNF302Q9NR11 478 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 GTF2IRD1Q9UHL9 959 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 TCEAL9Q9UHQ7 104 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 KIAA1024Q9UPX6 916 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 PCDHA10Q9Y5I2 948 aa10.8□□□□□ -0.68
DDX39A-220ENST00000593008 HAS3O00219 553 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 PSAPP07602 524 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 MCM4P33991 863 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 NPEPPSP55786 919 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 PTPN11Q06124 597 aaPredicted RBP10.79□□□□□ -0.68
DDX39A-220ENST00000593008 E2F4Q16254 413 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 TMEM240Q5SV17 173 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 PDXDC2PQ6P474 469 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 ZNF365Q70YC5 407 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 DEFB128Q7Z7B8 93 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 SESTD1Q86VW0 696 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 SMAP1Q8IYB5 467 aaPredicted RBP10.79□□□□□ -0.68
DDX39A-220ENST00000593008 GIMAP8Q8ND71 665 aaPredicted RBP10.79□□□□□ -0.68
DDX39A-220ENST00000593008 SEPT1Q8WYJ6 367 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 MRPS27Q92552 414 aaKnown RBP10.79□□□□□ -0.68
DDX39A-220ENST00000593008 DHX38Q92620 1227 aaKnown RBP10.79□□□□□ -0.68
DDX39A-220ENST00000593008 STAMQ92783 540 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 GLG1Q92896 1179 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 DHX58Q96C10 678 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 GBP4Q96PP9 640 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 RNPEPQ9H4A4 650 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 BLOC1S4Q9NUP1 217 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 DDX19AQ9NUU7 478 aaKnown RBP10.79□□□□□ -0.68
DDX39A-220ENST00000593008 HPSEQ9Y251 543 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 WDR81Q562E7 1941 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 SCN10AQ9Y5Y9 1956 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 EMSYQ7Z589 1322 aa10.79□□□□□ -0.68
DDX39A-220ENST00000593008 NPHP3-ACAD11A0A0J9YXS1 232 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 ZBTB42B2RXF5 422 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 PRR29P0C7W0 189 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 SMIM10L2AP0DMW4 78 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 SMIM10L2BP0DMW5 78 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 SFNP31947 248 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 UBA7P41226 1012 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 STAT5BP51692 787 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 IGBP1P78318 339 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 CACNB1Q02641 598 aaPredicted RBP10.78□□□□□ -0.68
DDX39A-220ENST00000593008 DHX8Q14562 1220 aaKnown RBP10.78□□□□□ -0.68
DDX39A-220ENST00000593008 KRT79Q5XKE5 535 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 ADALQ6DHV7 355 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 FAM109BQ6ICB4 259 aaPredicted RBP10.78□□□□□ -0.68
DDX39A-220ENST00000593008 ANO5Q75V66 913 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 OTOP2Q7RTS6 562 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 RETREG2Q8NC44 543 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 RASSF8Q8NHQ8 419 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 ERCC4Q92889 916 aaPredicted RBP10.78□□□□□ -0.68
DDX39A-220ENST00000593008 WNT8BQ93098 351 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 VWCEQ96DN2 955 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 MTRQ99707 1265 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 POLR3CQ9BUI4 534 aaPredicted RBP10.78□□□□□ -0.68
DDX39A-220ENST00000593008 IL23AQ9NPF7 189 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 SEPT9Q9UHD8 586 aaPredicted RBP10.78□□□□□ -0.68
DDX39A-220ENST00000593008 SERTAD1Q9UHV2 236 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 MAFBQ9Y5Q3 323 aaPredicted RBP10.78□□□□□ -0.68
DDX39A-220ENST00000593008 ARID2Q68CP9 1835 aa10.78□□□□□ -0.68
DDX39A-220ENST00000593008 FAM237AA0A1B0GTK4 181 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 A0A1W2PQ27 194 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 A0A1W2PQ64 194 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 A0A1W2PQD8 194 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 C17orf102A2RUQ5 167 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 GRXCR1A8MXD5 290 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 POLR2DO15514 142 aaKnown RBP10.77□□□□□ -0.69
DDX39A-220ENST00000593008 ACTN4O43707 911 aaKnown RBP10.77□□□□□ -0.69
DDX39A-220ENST00000593008 NR1I2O75469 434 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 FGBP02675 491 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 OATP04181 439 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 IQCF3P0C7M6 154 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 CMA1P23946 247 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 RPA1P27694 616 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 QARSP47897 775 aaKnown RBP10.77□□□□□ -0.69
DDX39A-220ENST00000593008 PSMC5P62195 406 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 RAD51AP2Q09MP3 1159 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 BFSP2Q13515 415 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 SNW1Q13573 536 aaKnown RBP10.77□□□□□ -0.69
DDX39A-220ENST00000593008 PDIA5Q14554 519 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 MCM6Q14566 821 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms