RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 ZNF579Q8NAF0 562 aaKnown RBP17.2■□□□□ 0.34
TRIM47-206ENST00000592942 EIF2AK1Q9BQI3 630 aaKnown RBP17.2■□□□□ 0.34
TRIM47-206ENST00000592942 TANC1Q9C0D5 1861 aa17.2■□□□□ 0.34
TRIM47-206ENST00000592942 EVPLQ92817 2033 aa17.2■□□□□ 0.34
TRIM47-206ENST00000592942 POTEMA6NI47 508 aa17.19■□□□□ 0.34
TRIM47-206ENST00000592942 CTSHP09668 335 aa17.19■□□□□ 0.34
TRIM47-206ENST00000592942 SPATA31C1P0DKV0 1188 aa17.19■□□□□ 0.34
TRIM47-206ENST00000592942 PDCP20941 246 aa17.19■□□□□ 0.34
TRIM47-206ENST00000592942 CTTNQ14247 550 aaKnown RBP17.19■□□□□ 0.34
TRIM47-206ENST00000592942 RILPL1Q5EBL4 403 aa17.19■□□□□ 0.34
TRIM47-206ENST00000592942 FAM109BQ6ICB4 259 aaPredicted RBP17.19■□□□□ 0.34
TRIM47-206ENST00000592942 HSCBQ8IWL3 235 aa17.19■□□□□ 0.34
TRIM47-206ENST00000592942 C4orf19Q8IY42 314 aa17.19■□□□□ 0.34
TRIM47-206ENST00000592942 NME8Q8N427 588 aa17.19■□□□□ 0.34
TRIM47-206ENST00000592942 LRCH3Q96II8 777 aa17.19■□□□□ 0.34
TRIM47-206ENST00000592942 RNPC3Q96LT9 517 aaKnown RBP17.19■□□□□ 0.34
TRIM47-206ENST00000592942 SH2D3AQ9BRG2 576 aa17.19■□□□□ 0.34
TRIM47-206ENST00000592942 FAM49AQ9H0Q0 323 aaPredicted RBP17.19■□□□□ 0.34
TRIM47-206ENST00000592942 MTMR6Q9Y217 621 aa17.19■□□□□ 0.34
TRIM47-206ENST00000592942 IGKV6-21A0A0C4DH24 114 aa17.18■□□□□ 0.34
TRIM47-206ENST00000592942 DDX11L8A8MPP1 907 aa17.18■□□□□ 0.34
TRIM47-206ENST00000592942 RESTQ13127 1097 aa17.18■□□□□ 0.34
TRIM47-206ENST00000592942 MKRN4PQ13434 485 aaPredicted RBP17.18■□□□□ 0.34
TRIM47-206ENST00000592942 PLEKHG4Q58EX7 1191 aa17.18■□□□□ 0.34
TRIM47-206ENST00000592942 FERMT3Q86UX7 667 aa17.18■□□□□ 0.34
TRIM47-206ENST00000592942 DBF4BQ8NFT6 615 aa17.18■□□□□ 0.34
TRIM47-206ENST00000592942 LXNQ9BS40 222 aa17.18■□□□□ 0.34
TRIM47-206ENST00000592942 FTOQ9C0B1 505 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRIM47-206ENST00000592942 CDHR5Q9HBB8 845 aa17.18■□□□□ 0.34
TRIM47-206ENST00000592942 CEP131Q9UPN4 1083 aa17.18■□□□□ 0.34
TRIM47-206ENST00000592942 CDY2AQ9Y6F7 541 aa17.18■□□□□ 0.34
TRIM47-206ENST00000592942 A0A087WWV3 80 aa17.17■□□□□ 0.34
TRIM47-206ENST00000592942 VPS37CA5D8V6 355 aaPredicted RBP17.17■□□□□ 0.34
TRIM47-206ENST00000592942 MAGEB2O15479 319 aa17.17■□□□□ 0.34
TRIM47-206ENST00000592942 LYPLA2O95372 231 aa17.17■□□□□ 0.34
TRIM47-206ENST00000592942 FXR2P51116 673 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRIM47-206ENST00000592942 NPEPPSP55786 919 aa17.17■□□□□ 0.34
TRIM47-206ENST00000592942 MRPS6P82932 125 aaKnown RBP17.17■□□□□ 0.34
TRIM47-206ENST00000592942 CYP4A11Q02928 519 aa17.17■□□□□ 0.34
TRIM47-206ENST00000592942 TMEM62Q0P6H9 643 aa17.17■□□□□ 0.34
TRIM47-206ENST00000592942 EFCAB12Q6NXP0 572 aa17.17■□□□□ 0.34
TRIM47-206ENST00000592942 BRAPQ7Z569 592 aa17.17■□□□□ 0.34
TRIM47-206ENST00000592942 CATSPER3Q86XQ3 398 aa17.17■□□□□ 0.34
TRIM47-206ENST00000592942 TPH2Q8IWU9 490 aa17.17■□□□□ 0.34
TRIM47-206ENST00000592942 ZSWIM4Q9H7M6 989 aa17.17■□□□□ 0.34
TRIM47-206ENST00000592942 SEPT9Q9UHD8 586 aaPredicted RBP17.17■□□□□ 0.34
TRIM47-206ENST00000592942 GRXCR1A8MXD5 290 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 STX6O43752 255 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 GPR32O75388 356 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 MAFO75444 373 aaPredicted RBP17.16■□□□□ 0.34
TRIM47-206ENST00000592942 MED24O75448 989 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 ATP2C1P98194 919 aaPredicted RBP17.16■□□□□ 0.34
TRIM47-206ENST00000592942 DRP2Q13474 957 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 PDIA5Q14554 519 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 LPIN1Q14693 890 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 MTERF2Q49AM1 385 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 FBXO47Q5MNV8 452 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 PLA2G4FQ68DD2 849 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 CNKSR3Q6P9H4 555 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 RSPH3Q86UC2 560 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 LRRC71Q8N4P6 559 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 IGSF22Q8N9C0 903 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 CELF4Q9BZC1 486 aaKnown RBP17.16■□□□□ 0.34
TRIM47-206ENST00000592942 AGO3Q9H9G7 860 aaKnown RBP17.16■□□□□ 0.34
TRIM47-206ENST00000592942 CYP26B1Q9NR63 512 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 KDM3AQ9Y4C1 1321 aa17.16■□□□□ 0.34
TRIM47-206ENST00000592942 SIP14410 1827 aa17.15■□□□□ 0.34
TRIM47-206ENST00000592942 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.15■□□□□ 0.34
TRIM47-206ENST00000592942 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.15■□□□□ 0.34
TRIM47-206ENST00000592942 LAD1O00515 517 aa17.15■□□□□ 0.34
TRIM47-206ENST00000592942 DKC1O60832 514 aaKnown RBP eCLIP17.15■□□□□ 0.34
TRIM47-206ENST00000592942 RPLP2P05387 115 aaKnown RBP17.15■□□□□ 0.34
TRIM47-206ENST00000592942 YWHABP31946 246 aaKnown RBP17.15■□□□□ 0.34
TRIM47-206ENST00000592942 PRPHP41219 470 aa17.15■□□□□ 0.34
TRIM47-206ENST00000592942 CLCN3P51790 818 aa17.15■□□□□ 0.34
TRIM47-206ENST00000592942 ECM1Q16610 540 aa17.15■□□□□ 0.34
TRIM47-206ENST00000592942 IER5Q5VY09 327 aa17.15■□□□□ 0.34
TRIM47-206ENST00000592942 FAM173BQ6P4H8 233 aa17.15■□□□□ 0.34
TRIM47-206ENST00000592942 METTL13Q8N6R0 699 aa17.15■□□□□ 0.34
TRIM47-206ENST00000592942 NEK9Q8TD19 979 aa17.15■□□□□ 0.34
TRIM47-206ENST00000592942 POLR3CQ9BUI4 534 aaPredicted RBP17.15■□□□□ 0.34
TRIM47-206ENST00000592942 VTNP04004 478 aa17.14■□□□□ 0.33
TRIM47-206ENST00000592942 GHRP10912 638 aa17.14■□□□□ 0.33
TRIM47-206ENST00000592942 RPA1P27694 616 aa17.14■□□□□ 0.33
TRIM47-206ENST00000592942 SMAD3P84022 425 aaKnown RBP17.14■□□□□ 0.33
TRIM47-206ENST00000592942 TBC1D8BQ0IIM8 1120 aa17.14■□□□□ 0.33
TRIM47-206ENST00000592942 SPRYD3Q8NCJ5 442 aa17.14■□□□□ 0.33
TRIM47-206ENST00000592942 TMEM40Q8WWA1 233 aa17.14■□□□□ 0.33
TRIM47-206ENST00000592942 ADAMTS10Q9H324 1103 aa17.14■□□□□ 0.33
TRIM47-206ENST00000592942 DHX33Q9H6R0 707 aaKnown RBP17.14■□□□□ 0.33
TRIM47-206ENST00000592942 SUGCTQ9HAC7 445 aa17.14■□□□□ 0.33
TRIM47-206ENST00000592942 TUFT1Q9NNX1 390 aa17.14■□□□□ 0.33
TRIM47-206ENST00000592942 TSHZ2Q9NRE2 1034 aa17.14■□□□□ 0.33
TRIM47-206ENST00000592942 TRPV2Q9Y5S1 764 aa17.14■□□□□ 0.33
TRIM47-206ENST00000592942 SQORQ9Y6N5 450 aa17.14■□□□□ 0.33
TRIM47-206ENST00000592942 ABHD14A-ACY1A0A1B0GW23 586 aa17.13■□□□□ 0.33
TRIM47-206ENST00000592942 BAIAP3O94812 1187 aa17.13■□□□□ 0.33
TRIM47-206ENST00000592942 ACTN1P12814 892 aa17.13■□□□□ 0.33
TRIM47-206ENST00000592942 XRCC6P12956 609 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRIM47-206ENST00000592942 WDR5P61964 334 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms