RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.68□□□□□ -0.38
ZNF540-210ENST00000592533 COL2A1P02458 1487 aaPredicted RBP12.68□□□□□ -0.38
ZNF540-210ENST00000592533 ZMYM2Q9UBW7 1377 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 UBE4BO95155 1302 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 FAM86B1E9PN63 330 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 PIK3CDO00329 1044 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 KCNK3O14649 394 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 FAM86B2P0C5J1 330 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 NFIAQ12857 509 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 PABPC4Q13310 644 aaKnown RBP eCLIP12.68□□□□□ -0.38
ZNF540-210ENST00000592533 TTC31Q49AM3 519 aaPredicted RBP12.68□□□□□ -0.38
ZNF540-210ENST00000592533 SLC30A5Q8TAD4 765 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 IDI2Q9BXS1 227 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 SCN9AQ15858 1988 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 H0YGN5 161 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 FERP16591 822 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 FKBP1AP62942 108 aaKnown RBP12.68□□□□□ -0.38
ZNF540-210ENST00000592533 FAM182BQ5T319 152 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 BTNL9Q6UXG8 535 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 VPS36Q86VN1 386 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 PACS2Q86VP3 889 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 SYCE1Q8N0S2 351 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 ZFP91Q96JP5 570 aaPredicted RBP12.68□□□□□ -0.38
ZNF540-210ENST00000592533 MKNK1Q9BUB5 465 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 SLITRK6Q9H5Y7 841 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 SYNPO2Q9UMS6 1093 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 NFS1Q9Y697 457 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 FAM169AQ9Y6X4 670 aa12.68□□□□□ -0.38
ZNF540-210ENST00000592533 F8W031 263 aaPredicted RBP12.67□□□□□ -0.38
ZNF540-210ENST00000592533 MSH4O15457 936 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 SLC27A3Q5K4L6 730 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 B4GALNT4Q76KP1 1039 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 HES6Q96HZ4 224 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 ZC3H12CQ9C0D7 883 aaKnown RBP12.67□□□□□ -0.38
ZNF540-210ENST00000592533 TMBIM4Q9HC24 238 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 GGA2Q9UJY4 613 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 USP21Q9UK80 565 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 AJAP1Q9UKB5 411 aaPredicted RBP12.67□□□□□ -0.38
ZNF540-210ENST00000592533 SMCHD1A6NHR9 2005 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 RIMBP2O15034 1052 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 ONECUT3O60422 494 aaPredicted RBP12.67□□□□□ -0.38
ZNF540-210ENST00000592533 TOM1O60784 492 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 NR1D1P20393 614 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 ITGB3BPQ13352 177 aaPredicted RBP12.67□□□□□ -0.38
ZNF540-210ENST00000592533 ZFPM1Q8IX07 1006 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 METTL13Q8N6R0 699 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 BBXQ8WY36 941 aaPredicted RBP12.67□□□□□ -0.38
ZNF540-210ENST00000592533 SYT11Q9BT88 431 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 EPN3Q9H201 632 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 GCNT4Q9P109 453 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 PI4KBQ9UBF8 816 aa12.67□□□□□ -0.38
ZNF540-210ENST00000592533 NOC2LQ9Y3T9 749 aaKnown RBP12.67□□□□□ -0.38
ZNF540-210ENST00000592533 DDX3XO00571 662 aaKnown RBP eCLIP12.66□□□□□ -0.38
ZNF540-210ENST00000592533 OPLAHO14841 1288 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 TGFB1I1O43294 461 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 H2AFZP0C0S5 128 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 LSP1P33241 339 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 CRKP46108 304 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 SCNN1DP51172 638 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 GUCY2FP51841 1108 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 HDLBPQ00341 1268 aaKnown RBP12.66□□□□□ -0.38
ZNF540-210ENST00000592533 PDCLQ13371 301 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 TRADDQ15628 312 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 CERKLQ49MI3 558 aaPredicted RBP12.66□□□□□ -0.38
ZNF540-210ENST00000592533 TMEM179Q6ZVK1 233 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 H2AFVQ71UI9 128 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 NT5DC3Q86UY8 548 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 FBXO11Q86XK2 927 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 FMNL3Q8IVF7 1028 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 SH2D3CQ8N5H7 860 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 LRRC45Q96CN5 670 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 RNPC3Q96LT9 517 aaKnown RBP12.66□□□□□ -0.38
ZNF540-210ENST00000592533 RUSC1Q9BVN2 902 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 ZHX3Q9H4I2 956 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 TUFT1Q9NNX1 390 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 FRMPD4Q14CM0 1322 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 SPDYE3A6NKU9 549 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 MUTP22033 750 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 YTHDF3Q7Z739 585 aaKnown RBP12.66□□□□□ -0.38
ZNF540-210ENST00000592533 PLAAQ9Y263 795 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 DIS3Q9Y2L1 958 aaKnown RBP12.66□□□□□ -0.38
ZNF540-210ENST00000592533 RABGAP1Q9Y3P9 1069 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 IGLV3-22A0A075B6J6 115 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 TBCAO75347 108 aaKnown RBP12.66□□□□□ -0.38
ZNF540-210ENST00000592533 SPDYCQ5MJ68 293 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 HSD17B14Q9BPX1 270 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 EIF2AK1Q9BQI3 630 aaKnown RBP12.66□□□□□ -0.38
ZNF540-210ENST00000592533 ATRNL1Q5VV63 1379 aa12.66□□□□□ -0.38
ZNF540-210ENST00000592533 PSME4Q14997 1843 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 RSPH10B2B2RC85 870 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 MEIS1O00470 390 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 SART1O43290 800 aaKnown RBP12.65□□□□□ -0.38
ZNF540-210ENST00000592533 PPP1R37O75864 691 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 RSPH10BP0C881 870 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 HSD17B3P37058 310 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 STAT1P42224 750 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 CASP4P49662 377 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 DNA2P51530 1060 aa12.65□□□□□ -0.38
ZNF540-210ENST00000592533 UAP1Q16222 522 aaPredicted RBP12.65□□□□□ -0.38
ZNF540-210ENST00000592533 PTGISQ16647 500 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms