RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 STBD1O95210 358 aa23.21■■□□□ 1.31
DNMT1-227ENST00000592342 SPATA31C1P0DKV0 1188 aa23.21■■□□□ 1.31
DNMT1-227ENST00000592342 NCLP19338 710 aaKnown RBP23.21■■□□□ 1.31
DNMT1-227ENST00000592342 MUTP22033 750 aa23.21■■□□□ 1.31
DNMT1-227ENST00000592342 ITGB8P26012 769 aa23.21■■□□□ 1.31
DNMT1-227ENST00000592342 CDC25AP30304 524 aa23.21■■□□□ 1.31
DNMT1-227ENST00000592342 LONP1P36776 959 aaKnown RBP23.21■■□□□ 1.31
DNMT1-227ENST00000592342 ZRSR1Q15695 479 aaKnown RBP23.21■■□□□ 1.31
DNMT1-227ENST00000592342 XKR9Q5GH70 373 aa23.21■■□□□ 1.31
DNMT1-227ENST00000592342 MFSD5Q6N075 450 aa23.21■■□□□ 1.31
DNMT1-227ENST00000592342 RUFY4Q6ZNE9 571 aa23.21■■□□□ 1.31
DNMT1-227ENST00000592342 METTL13Q8N6R0 699 aa23.21■■□□□ 1.31
DNMT1-227ENST00000592342 DNAJB3Q8WWF6 145 aa23.21■■□□□ 1.31
DNMT1-227ENST00000592342 WNT8BQ93098 351 aa23.21■■□□□ 1.31
DNMT1-227ENST00000592342 CDK5RAP3Q96JB5 506 aa23.21■■□□□ 1.31
DNMT1-227ENST00000592342 NACC1Q96RE7 527 aa23.21■■□□□ 1.31
DNMT1-227ENST00000592342 CYP26B1Q9NR63 512 aa23.21■■□□□ 1.31
DNMT1-227ENST00000592342 KAT6AQ92794 2004 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 SMIM35A0A1B0GVV1 85 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 ZBTB42B2RXF5 422 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 SPTLC2O15270 562 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 C22orf31O95567 290 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 YEATS4O95619 227 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 RPLP2P05387 115 aaKnown RBP23.2■■□□□ 1.3
DNMT1-227ENST00000592342 CKBP12277 381 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 SELPP16109 830 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 TMOD1P28289 359 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 UBA7P41226 1012 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 POTEGQ6S5H5 508 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 LRRC8DQ7L1W4 858 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 KRI1Q8N9T8 703 aaKnown RBP23.2■■□□□ 1.3
DNMT1-227ENST00000592342 LINC00301Q8NCQ3 95 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 RASSF8Q8NHQ8 419 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 PIGOQ8TEQ8 1089 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 FBXO2Q9UK22 296 aaPredicted RBP23.2■■□□□ 1.3
DNMT1-227ENST00000592342 PPME1Q9Y570 386 aa23.2■■□□□ 1.3
DNMT1-227ENST00000592342 SRPRBQ9Y5M8 271 aaKnown RBP23.2■■□□□ 1.3
DNMT1-227ENST00000592342 KDM3AQ9Y4C1 1321 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 ZBTB39O15060 712 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 CAND2O75155 1236 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 CTSHP09668 335 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 DDIT3P35638 169 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 MAGEA10P43363 369 aaPredicted RBP23.19■■□□□ 1.3
DNMT1-227ENST00000592342 NPEPPSP55786 919 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 KRT85P78386 507 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 FPGSQ05932 587 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 RBL2Q08999 1139 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 TARBP2Q15633 366 aaKnown RBP23.19■■□□□ 1.3
DNMT1-227ENST00000592342 TRIM71Q2Q1W2 868 aaKnown RBP23.19■■□□□ 1.3
DNMT1-227ENST00000592342 EFCAB12Q6NXP0 572 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 CABP7Q86V35 215 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 EXOC8Q8IYI6 725 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 SCLYQ96I15 445 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 JPH2Q9BR39 696 aaPredicted RBP23.19■■□□□ 1.3
DNMT1-227ENST00000592342 WNT8AQ9H1J5 351 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 SUGCTQ9HAC7 445 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 ANKEF1Q9NU02 776 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 KIAA1024Q9UPX6 916 aa23.19■■□□□ 1.3
DNMT1-227ENST00000592342 M0QZ92 97 aa23.18■■□□□ 1.3
DNMT1-227ENST00000592342 PPP6R2O75170 966 aa23.18■■□□□ 1.3
DNMT1-227ENST00000592342 IQCF3P0C7M6 154 aa23.18■■□□□ 1.3
DNMT1-227ENST00000592342 XRCC6P12956 609 aaKnown RBP eCLIP23.18■■□□□ 1.3
DNMT1-227ENST00000592342 POLGP54098 1239 aaPredicted RBP23.18■■□□□ 1.3
DNMT1-227ENST00000592342 GRIN1Q05586 938 aa23.18■■□□□ 1.3
DNMT1-227ENST00000592342 ZNF618Q5T7W0 954 aa23.18■■□□□ 1.3
DNMT1-227ENST00000592342 SLC7A3Q8WY07 619 aa23.18■■□□□ 1.3
DNMT1-227ENST00000592342 CALML4Q96GE6 196 aa23.18■■□□□ 1.3
DNMT1-227ENST00000592342 MAP7D2Q96T17 732 aa23.18■■□□□ 1.3
DNMT1-227ENST00000592342 NT5C3AQ9H0P0 336 aa23.18■■□□□ 1.3
DNMT1-227ENST00000592342 CSRNP2Q9H175 543 aa23.18■■□□□ 1.3
DNMT1-227ENST00000592342 DDX19AQ9NUU7 478 aaKnown RBP23.18■■□□□ 1.3
DNMT1-227ENST00000592342 MORC2Q9Y6X9 1032 aaPredicted RBP23.18■■□□□ 1.3
DNMT1-227ENST00000592342 A0A087WWV3 80 aa23.17■■□□□ 1.3
DNMT1-227ENST00000592342 RSPH10B2B2RC85 870 aa23.17■■□□□ 1.3
DNMT1-227ENST00000592342 RSPH10BP0C881 870 aa23.17■■□□□ 1.3
DNMT1-227ENST00000592342 CSF2RAP15509 400 aa23.17■■□□□ 1.3
DNMT1-227ENST00000592342 RFC5P40937 340 aa23.17■■□□□ 1.3
DNMT1-227ENST00000592342 DNM2P50570 870 aa23.17■■□□□ 1.3
DNMT1-227ENST00000592342 PPIGQ13427 754 aaKnown RBP eCLIP23.17■■□□□ 1.34e-7■■■□□ 15.6
DNMT1-227ENST00000592342 IER5Q5VY09 327 aa23.17■■□□□ 1.3
DNMT1-227ENST00000592342 NME8Q8N427 588 aa23.17■■□□□ 1.3
DNMT1-227ENST00000592342 LRRC71Q8N4P6 559 aa23.17■■□□□ 1.3
DNMT1-227ENST00000592342 KCNG4Q8TDN1 519 aa23.17■■□□□ 1.3
DNMT1-227ENST00000592342 CIZ1Q9ULV3 898 aaPredicted RBP23.17■■□□□ 1.3
DNMT1-227ENST00000592342 WDR81Q562E7 1941 aa23.17■■□□□ 1.3
DNMT1-227ENST00000592342 TRIP12Q14669 1992 aaPredicted RBP23.16■■□□□ 1.3
DNMT1-227ENST00000592342 MYH15Q9Y2K3 1946 aa23.16■■□□□ 1.3
DNMT1-227ENST00000592342 MAFO75444 373 aaPredicted RBP23.16■■□□□ 1.3
DNMT1-227ENST00000592342 PARNO95453 639 aaKnown RBP23.16■■□□□ 1.3
DNMT1-227ENST00000592342 TXLNAP40222 546 aa23.16■■□□□ 1.3
DNMT1-227ENST00000592342 RARRES1P49788 294 aa23.16■■□□□ 1.3
DNMT1-227ENST00000592342 CLCN3P51790 818 aa23.16■■□□□ 1.3
DNMT1-227ENST00000592342 ECM1Q16610 540 aa23.16■■□□□ 1.3
DNMT1-227ENST00000592342 SPECC1Q5M775 1068 aa23.16■■□□□ 1.3
DNMT1-227ENST00000592342 PRPF38BQ5VTL8 546 aaKnown RBP23.16■■□□□ 1.3
DNMT1-227ENST00000592342 RPAINQ86UA6 219 aa23.16■■□□□ 1.3
DNMT1-227ENST00000592342 ZNF579Q8NAF0 562 aaKnown RBP23.16■■□□□ 1.3
DNMT1-227ENST00000592342 CLIC6Q96NY7 704 aa23.16■■□□□ 1.3
DNMT1-227ENST00000592342 MMTAG2Q9BU76 263 aaKnown RBP23.16■■□□□ 1.3
DNMT1-227ENST00000592342 BMP2KQ9NSY1 1161 aaPredicted RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms