RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 TUBE1Q9UJT0 475 aa23.61■■□□□ 1.37
CIRBP-229ENST00000590704 PCDHA2Q9Y5H9 948 aa23.61■■□□□ 1.37
CIRBP-229ENST00000590704 SCN5AQ14524 2016 aa23.6■■□□□ 1.37
CIRBP-229ENST00000590704 VWA3AA6NCI4 1184 aa23.6■■□□□ 1.37
CIRBP-229ENST00000590704 PITPNM1O00562 1244 aa23.6■■□□□ 1.37
CIRBP-229ENST00000590704 MAGEA10P43363 369 aaPredicted RBP23.6■■□□□ 1.37
CIRBP-229ENST00000590704 DNM1Q05193 864 aaKnown RBP23.6■■□□□ 1.37
CIRBP-229ENST00000590704 FOXD4L6Q3SYB3 417 aaPredicted RBP23.6■■□□□ 1.37
CIRBP-229ENST00000590704 MFSD5Q6N075 450 aa23.6■■□□□ 1.37
CIRBP-229ENST00000590704 FOXD4L3Q6VB84 417 aaPredicted RBP23.6■■□□□ 1.37
CIRBP-229ENST00000590704 USP49Q70CQ1 688 aa23.6■■□□□ 1.37
CIRBP-229ENST00000590704 FAM167AQ96KS9 214 aa23.6■■□□□ 1.37
CIRBP-229ENST00000590704 TUFT1Q9NNX1 390 aa23.6■■□□□ 1.37
CIRBP-229ENST00000590704 DDX11L8A8MPP1 907 aa23.59■■□□□ 1.37
CIRBP-229ENST00000590704 BMP15O95972 392 aa23.59■■□□□ 1.37
CIRBP-229ENST00000590704 IQCF3P0C7M6 154 aa23.59■■□□□ 1.37
CIRBP-229ENST00000590704 GNAT1P11488 350 aa23.59■■□□□ 1.37
CIRBP-229ENST00000590704 RAG1P15918 1043 aa23.59■■□□□ 1.37
CIRBP-229ENST00000590704 CCL23P55773 120 aa23.59■■□□□ 1.37
CIRBP-229ENST00000590704 ZNF618Q5T7W0 954 aa23.59■■□□□ 1.37
CIRBP-229ENST00000590704 KCNK18Q7Z418 384 aa23.59■■□□□ 1.37
CIRBP-229ENST00000590704 KIAA0319LQ8IZA0 1049 aa23.59■■□□□ 1.37
CIRBP-229ENST00000590704 NEK9Q8TD19 979 aa23.59■■□□□ 1.37
CIRBP-229ENST00000590704 SCLYQ96I15 445 aa23.59■■□□□ 1.37
CIRBP-229ENST00000590704 CLIC6Q96NY7 704 aa23.59■■□□□ 1.37
CIRBP-229ENST00000590704 PNMA5Q96PV4 448 aa23.59■■□□□ 1.37
CIRBP-229ENST00000590704 DAXXQ9UER7 740 aaPredicted RBP23.59■■□□□ 1.37
CIRBP-229ENST00000590704 SRPRBQ9Y5M8 271 aaKnown RBP23.59■■□□□ 1.37
CIRBP-229ENST00000590704 TCHHQ07283 1943 aa23.59■■□□□ 1.37
CIRBP-229ENST00000590704 CHRNA1P02708 482 aa23.58■■□□□ 1.37
CIRBP-229ENST00000590704 YWHABP31946 246 aaKnown RBP23.58■■□□□ 1.37
CIRBP-229ENST00000590704 MDM2Q00987 491 aaPredicted RBP23.58■■□□□ 1.37
CIRBP-229ENST00000590704 MGAT3Q09327 533 aa23.58■■□□□ 1.37
CIRBP-229ENST00000590704 DRP2Q13474 957 aa23.58■■□□□ 1.37
CIRBP-229ENST00000590704 HYIQ5T013 277 aa23.58■■□□□ 1.37
CIRBP-229ENST00000590704 POTEGQ6S5H5 508 aa23.58■■□□□ 1.37
CIRBP-229ENST00000590704 CAGE1Q8TC20 777 aa23.58■■□□□ 1.37
CIRBP-229ENST00000590704 PIGOQ8TEQ8 1089 aa23.58■■□□□ 1.37
CIRBP-229ENST00000590704 DNAJB3Q8WWF6 145 aa23.58■■□□□ 1.37
CIRBP-229ENST00000590704 SMIM35A0A1B0GVV1 85 aa23.57■■□□□ 1.36
CIRBP-229ENST00000590704 CSF2RAP15509 400 aa23.57■■□□□ 1.36
CIRBP-229ENST00000590704 TMEM266Q2M3C6 531 aa23.57■■□□□ 1.36
CIRBP-229ENST00000590704 FAM26DQ5JW98 314 aa23.57■■□□□ 1.36
CIRBP-229ENST00000590704 CYP26B1Q9NR63 512 aa23.57■■□□□ 1.36
CIRBP-229ENST00000590704 SIP14410 1827 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 RARRES1P49788 294 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 GRB10Q13322 594 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 TCTN1Q2MV58 587 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 MTERF2Q49AM1 385 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 TNPO1Q92973 898 aaKnown RBP23.56■■□□□ 1.36
CIRBP-229ENST00000590704 CSRNP2Q9H175 543 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 DHX33Q9H6R0 707 aaKnown RBP23.56■■□□□ 1.36
CIRBP-229ENST00000590704 SEPT9Q9UHD8 586 aaPredicted RBP23.56■■□□□ 1.36
CIRBP-229ENST00000590704 RCOR1Q9UKL0 485 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 CEP131Q9UPN4 1083 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 NOD1Q9Y239 953 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 LAMA2P24043 3122 aaKnown RBP23.56■■□□□ 1.36
CIRBP-229ENST00000590704 NBNO60934 754 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 MAFO75444 373 aaPredicted RBP23.56■■□□□ 1.36
CIRBP-229ENST00000590704 XRCC6P12956 609 aaKnown RBP eCLIP23.56■■□□□ 1.36
CIRBP-229ENST00000590704 MUTP22033 750 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 SPECC1Q5M775 1068 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 TAF2Q6P1X5 1199 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 CDHR5Q9HBB8 845 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 XPNPEP1Q9NQW7 623 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 ANKEF1Q9NU02 776 aa23.56■■□□□ 1.36
CIRBP-229ENST00000590704 YEATS4O95619 227 aa23.55■■□□□ 1.36
CIRBP-229ENST00000590704 SELPP16109 830 aa23.55■■□□□ 1.36
CIRBP-229ENST00000590704 THPOP40225 353 aa23.55■■□□□ 1.36
CIRBP-229ENST00000590704 BFSP2Q13515 415 aa23.55■■□□□ 1.36
CIRBP-229ENST00000590704 AXDND1Q5T1B0 1012 aaPredicted RBP23.55■■□□□ 1.36
CIRBP-229ENST00000590704 LRRC71Q8N4P6 559 aa23.55■■□□□ 1.36
CIRBP-229ENST00000590704 SNX29Q8TEQ0 813 aa23.55■■□□□ 1.36
CIRBP-229ENST00000590704 ZNF396Q96N95 335 aaPredicted RBP23.55■■□□□ 1.36
CIRBP-229ENST00000590704 ARID2Q68CP9 1835 aa23.55■■□□□ 1.36
CIRBP-229ENST00000590704 TANC1Q9C0D5 1861 aa23.54■■□□□ 1.36
CIRBP-229ENST00000590704 DKC1O60832 514 aaKnown RBP eCLIP23.54■■□□□ 1.36
CIRBP-229ENST00000590704 LONP1P36776 959 aaKnown RBP23.54■■□□□ 1.36
CIRBP-229ENST00000590704 CCT6AP40227 531 aaKnown RBP23.54■■□□□ 1.36
CIRBP-229ENST00000590704 CLCN3P51790 818 aa23.54■■□□□ 1.36
CIRBP-229ENST00000590704 ATL3Q6DD88 541 aa23.54■■□□□ 1.36
CIRBP-229ENST00000590704 EFCAB12Q6NXP0 572 aa23.54■■□□□ 1.36
CIRBP-229ENST00000590704 LRRC8DQ7L1W4 858 aa23.54■■□□□ 1.36
CIRBP-229ENST00000590704 EPSTI1Q96J88 318 aa23.54■■□□□ 1.36
CIRBP-229ENST00000590704 AK8Q96MA6 479 aa23.54■■□□□ 1.36
CIRBP-229ENST00000590704 PRKAG2Q9UGJ0 569 aa23.54■■□□□ 1.36
CIRBP-229ENST00000590704 KIAA1024Q9UPX6 916 aa23.54■■□□□ 1.36
CIRBP-229ENST00000590704 SPTLC2O15270 562 aa23.53■■□□□ 1.36
CIRBP-229ENST00000590704 MAGEB2O15479 319 aa23.53■■□□□ 1.36
CIRBP-229ENST00000590704 PPP6R2O75170 966 aa23.53■■□□□ 1.36
CIRBP-229ENST00000590704 GPR32O75388 356 aa23.53■■□□□ 1.36
CIRBP-229ENST00000590704 CXCL10P02778 98 aa23.53■■□□□ 1.36
CIRBP-229ENST00000590704 BMP8BP34820 402 aa23.53■■□□□ 1.36
CIRBP-229ENST00000590704 ANP32AP39687 249 aaKnown RBP23.53■■□□□ 1.36
CIRBP-229ENST00000590704 TMEM119Q4V9L6 283 aa23.53■■□□□ 1.36
CIRBP-229ENST00000590704 CEP170P1Q96L14 293 aa23.53■■□□□ 1.36
CIRBP-229ENST00000590704 FAM49AQ9H0Q0 323 aaPredicted RBP23.53■■□□□ 1.36
CIRBP-229ENST00000590704 DBR1Q9UK59 544 aaKnown RBP23.53■■□□□ 1.36
CIRBP-229ENST00000590704 E9PMD0 336 aa23.52■■□□□ 1.36
CIRBP-229ENST00000590704 CAND2O75155 1236 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms