RNA–Protein interactions for RNA: ENST00000590588.5

ZNF540-209, Transcript of zinc finger protein 540, humanhuman

TSL 3

Gene ZNF540, Length 563 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-209ENST00000590588 ODR4Q5SWX8 454 aa12.67□□□□□ -0.38
ZNF540-209ENST00000590588 KIAA1841Q6NSI8 718 aa12.67□□□□□ -0.38
ZNF540-209ENST00000590588 SLC24A5Q71RS6 500 aa12.67□□□□□ -0.38
ZNF540-209ENST00000590588 NLRX1Q86UT6 975 aa12.67□□□□□ -0.38
ZNF540-209ENST00000590588 TBC1D10CQ8IV04 446 aa12.67□□□□□ -0.38
ZNF540-209ENST00000590588 SIX5Q8N196 739 aa12.67□□□□□ -0.38
ZNF540-209ENST00000590588 STAG2Q8N3U4 1231 aa12.67□□□□□ -0.38
ZNF540-209ENST00000590588 ACSF2Q96CM8 615 aaPredicted RBP12.67□□□□□ -0.38
ZNF540-209ENST00000590588 EVI5LQ96CN4 794 aa12.67□□□□□ -0.38
ZNF540-209ENST00000590588 ZSCAN10Q96SZ4 725 aaPredicted RBP12.67□□□□□ -0.38
ZNF540-209ENST00000590588 ATP6V0A4Q9HBG4 840 aa12.67□□□□□ -0.38
ZNF540-209ENST00000590588 ERVK-5Q9HDB9 667 aa12.67□□□□□ -0.38
ZNF540-209ENST00000590588 RGS18Q9NS28 235 aa12.67□□□□□ -0.38
ZNF540-209ENST00000590588 DUSP12Q9UNI6 340 aa12.67□□□□□ -0.38
ZNF540-209ENST00000590588 KDM3AQ9Y4C1 1321 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 DENND3A2RUS2 1198 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 KLRF2D3W0D1 207 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 ZNF213O14771 459 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 ARP10275 920 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 INSRRP14616 1297 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 PPM1AP35813 382 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 KRT76Q01546 638 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 SMC1AQ14683 1233 aaKnown RBP12.66□□□□□ -0.38
ZNF540-209ENST00000590588 TMEM266Q2M3C6 531 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 RARS2Q5T160 578 aaKnown RBP12.66□□□□□ -0.38
ZNF540-209ENST00000590588 XRRA1Q6P2D8 792 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 KCNT2Q6UVM3 1135 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 DCLK2Q8N568 766 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 ADAM2Q99965 735 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 HCSTQ9UBK5 93 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 PCDHA2Q9Y5H9 948 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 FRYLO94915 3013 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 MYH6P13533 1939 aa12.66□□□□□ -0.38
ZNF540-209ENST00000590588 NEDD4P46934 1319 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 FRMPD4Q14CM0 1322 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 CACNA1GO43497 2377 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 GSTTP1A0A1W2PQM5 241 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 C2orf71A6NGG8 1288 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 C9IYK1 514 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 CLASP2O75122 1294 aaKnown RBP12.65□□□□□ -0.38
ZNF540-209ENST00000590588 RPS6KA5O75582 802 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 PDE4AP27815 886 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 ST3GAL2Q16842 350 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 KIAA0319Q5VV43 1072 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 PCNX4Q63HM2 1172 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 OTOP3Q7RTS5 596 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 ENAHQ8N8S7 591 aaPredicted RBP12.65□□□□□ -0.38
ZNF540-209ENST00000590588 ZBTB10Q96DT7 871 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 FAM227BQ96M60 508 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 ZNF558Q96NG5 402 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 ELAC1Q9H777 363 aaKnown RBP12.65□□□□□ -0.38
ZNF540-209ENST00000590588 KCNK12Q9HB15 430 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 DZANK1Q9NVP4 752 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 TMEM161AQ9NX61 479 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 SPG21Q9NZD8 308 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 ZSWIM5Q9P217 1185 aa12.65□□□□□ -0.38
ZNF540-209ENST00000590588 SMIM35A0A1B0GVV1 85 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 GPR182O15218 404 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 MGEA5O60502 916 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 ATP9AO75110 1047 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 MX1P20591 662 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 RFX1P22670 979 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 FAM189BP81408 668 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 TBC1D8BQ0IIM8 1120 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 TICAM2Q86XR7 235 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 HOMER1Q86YM7 354 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 GPR161Q8N6U8 529 aaKnown RBP12.64□□□□□ -0.39
ZNF540-209ENST00000590588 C12orf76Q8N812 135 aaPredicted RBP12.64□□□□□ -0.39
ZNF540-209ENST00000590588 TMEM87AQ8NBN3 555 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 RIN2Q8WYP3 895 aaPredicted RBP12.64□□□□□ -0.39
ZNF540-209ENST00000590588 BORCS6Q96GS4 357 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 CDHR1Q96JP9 859 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 TMEM117Q9H0C3 514 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 PPP4R2Q9NY27 417 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 WNT16Q9UBV4 365 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 CFAP47Q6ZTR5 3102 aa12.64□□□□□ -0.39
ZNF540-209ENST00000590588 HOXA2O43364 376 aa12.63□□□□□ -0.39
ZNF540-209ENST00000590588 CXCL14O95715 111 aa12.63□□□□□ -0.39
ZNF540-209ENST00000590588 SP9P0CG40 484 aa12.63□□□□□ -0.39
ZNF540-209ENST00000590588 FGFR1P11362 822 aa12.63□□□□□ -0.39
ZNF540-209ENST00000590588 CA8P35219 290 aa12.63□□□□□ -0.39
ZNF540-209ENST00000590588 ATXN1P54253 815 aaKnown RBP12.63□□□□□ -0.39
ZNF540-209ENST00000590588 LRRC55Q6ZSA7 311 aa12.63□□□□□ -0.39
ZNF540-209ENST00000590588 OTUD7AQ8TE49 926 aaPredicted RBP12.63□□□□□ -0.39
ZNF540-209ENST00000590588 PIGSQ96S52 555 aa12.63□□□□□ -0.39
ZNF540-209ENST00000590588 RIOX1Q9H6W3 641 aa12.63□□□□□ -0.39
ZNF540-209ENST00000590588 IGSF9Q9P2J2 1179 aa12.63□□□□□ -0.39
ZNF540-209ENST00000590588 MAD2L2Q9UI95 211 aa12.63□□□□□ -0.39
ZNF540-209ENST00000590588 ST3GAL5Q9UNP4 418 aa12.63□□□□□ -0.39
ZNF540-209ENST00000590588 GINS2Q9Y248 185 aa12.63□□□□□ -0.39
ZNF540-209ENST00000590588 NOC2LQ9Y3T9 749 aaKnown RBP12.63□□□□□ -0.39
ZNF540-209ENST00000590588 FNDC1Q4ZHG4 1894 aaPredicted RBP12.63□□□□□ -0.39
ZNF540-209ENST00000590588 ACACBO00763 2458 aa12.63□□□□□ -0.39
ZNF540-209ENST00000590588 A0A0D9SFI3 127 aa12.62□□□□□ -0.39
ZNF540-209ENST00000590588 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
ZNF540-209ENST00000590588 PALM3A6NDB9 673 aaPredicted RBP12.62□□□□□ -0.39
ZNF540-209ENST00000590588 B4E1Z4 1266 aa12.62□□□□□ -0.39
ZNF540-209ENST00000590588 KCNA2P16389 499 aa12.62□□□□□ -0.39
ZNF540-209ENST00000590588 IFIT1BQ5T764 474 aaKnown RBP12.62□□□□□ -0.39
ZNF540-209ENST00000590588 KANK3Q6NY19 840 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms