RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 LRRC71Q8N4P6 559 aa15.77■□□□□ 0.12
SCAMP4-212ENST00000590266 SEPT8Q92599 483 aa15.77■□□□□ 0.12
SCAMP4-212ENST00000590266 TIFAQ96CG3 184 aa15.77■□□□□ 0.12
SCAMP4-212ENST00000590266 DYDC2Q96IM9 177 aa15.77■□□□□ 0.12
SCAMP4-212ENST00000590266 GUCD1Q96NT3 240 aa15.77■□□□□ 0.12
SCAMP4-212ENST00000590266 IFIH1Q9BYX4 1025 aaKnown RBP15.77■□□□□ 0.12
SCAMP4-212ENST00000590266 TMEM60Q9H2L4 133 aa15.77■□□□□ 0.12
SCAMP4-212ENST00000590266 TTC12Q9H892 705 aaPredicted RBP15.77■□□□□ 0.12
SCAMP4-212ENST00000590266 MSRAQ9UJ68 235 aa15.77■□□□□ 0.12
SCAMP4-212ENST00000590266 VTNP04004 478 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 DEFB103AP81534 67 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 MGAT3Q09327 533 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 TBC1D8BQ0IIM8 1120 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 CTTNQ14247 550 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 PLEKHG4Q58EX7 1191 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 XKR3Q5GH77 459 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 FAM26DQ5JW98 314 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 LARP1BQ659C4 914 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 PLA2G4FQ68DD2 849 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 FAM117BQ6P1L5 589 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 RPAINQ86UA6 219 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 CDX2Q99626 313 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 LXNQ9BS40 222 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 ZBED2Q9BTP6 218 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 NKX2-4Q9H2Z4 354 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 SEMA6BQ9H3T3 888 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 SUGCTQ9HAC7 445 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 RGL1Q9NZL6 768 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 AKT3Q9Y243 479 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 TRPV2Q9Y5S1 764 aa15.76■□□□□ 0.11
SCAMP4-212ENST00000590266 ABHD14A-ACY1A0A1B0GW23 586 aa15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 POTEMA6NI47 508 aa15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 RPLP2P05387 115 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 P4HBP07237 508 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 MYOGP15173 224 aa15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 U2AF2P26368 475 aaKnown RBP eCLIP15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 QARSP47897 775 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 SPIRE1Q08AE8 756 aa15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 LPIN1Q14693 890 aa15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 EPHA7Q15375 998 aa15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 RAB30Q15771 203 aa15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 KIZQ2M2Z5 673 aa15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 EFCAB12Q6NXP0 572 aa15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 TPH2Q8IWU9 490 aa15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 KIAA0319LQ8IZA0 1049 aa15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 MYOCDQ8IZQ8 938 aa15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 ZNF668Q96K58 619 aaPredicted RBP15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 SLC9A7Q96T83 725 aa15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 WRAP73Q9P2S5 460 aaPredicted RBP15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 YBX2Q9Y2T7 364 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 TANC1Q9C0D5 1861 aa15.75■□□□□ 0.11
SCAMP4-212ENST00000590266 VPS37CA5D8V6 355 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 K7ELQ4 463 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 MAGEB2O15479 319 aa15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 DKC1O60832 514 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 OR52Z1P0C646 297 aa15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 IBSPP21815 317 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 CD52P31358 61 aa15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 TECP42680 631 aa15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 CUL4AQ13619 759 aa15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 FBXO47Q5MNV8 452 aa15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 HERC6Q8IVU3 1022 aa15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 NME8Q8N427 588 aa15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 SCLT1Q96NL6 688 aa15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 MTMR9Q96QG7 549 aa15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 MAP7D2Q96T17 732 aa15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 EIF2AK1Q9BQI3 630 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 CELF4Q9BZC1 486 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 BMP2KQ9NSY1 1161 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 PCDHB6Q9Y5E3 794 aa15.74■□□□□ 0.11
SCAMP4-212ENST00000590266 TMEM265A0A087WTH1 108 aa15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 TLL1O43897 1013 aa15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 EFCAB14O75071 495 aa15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 UPP2O95045 317 aa15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 AMHP03971 560 aa15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 TMOD1P28289 359 aa15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 TRAPPC10P48553 1259 aa15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 TMEM266Q2M3C6 531 aa15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 TSHZ1Q6ZSZ6 1077 aa15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 ANO5Q75V66 913 aa15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 APBB2Q92870 758 aa15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 OSMRQ99650 979 aa15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 TTYH1Q9H313 450 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 AGO3Q9H9G7 860 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 SLC28A3Q9HAS3 691 aa15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 CDHR5Q9HBB8 845 aa15.73■□□□□ 0.11
SCAMP4-212ENST00000590266 STBD1O95210 358 aa15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 CA3P07451 260 aa15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 FOSL2P15408 326 aa15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 YWHABP31946 246 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 TOB1P50616 345 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 NPEPPSP55786 919 aa15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 PAK2Q13177 524 aa15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 PPP2R2DQ66LE6 453 aa15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 HSCBQ8IWL3 235 aa15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 MAFAQ8NHW3 353 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 PHOSPHO2Q8TCD6 241 aa15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 MYLIPQ8WY64 445 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms