RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 CCDC113Q9H0I3 377 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 ERVK-5Q9HDB9 667 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 OSGEPQ9NPF4 335 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 AJAP1Q9UKB5 411 aaPredicted RBP17.14■□□□□ 0.33
MBD1-222ENST00000590208 SNX24Q9Y343 169 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 HGSO14964 777 aaPredicted RBP17.14■□□□□ 0.33
MBD1-222ENST00000590208 RARAP10276 462 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 UCHL3P15374 230 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 NQO1P15559 274 aaKnown RBP17.14■□□□□ 0.33
MBD1-222ENST00000590208 PMS2P54278 862 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 NCALDP61601 193 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 ADAM9Q13443 819 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 IFI16Q16666 785 aaKnown RBP17.14■□□□□ 0.33
MBD1-222ENST00000590208 C3orf67Q6ZVT6 689 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 ZNF483Q8TF39 744 aaPredicted RBP17.14■□□□□ 0.33
MBD1-222ENST00000590208 ZDHHC18Q9NUE0 388 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 TFCP2L1Q9NZI6 479 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 SHANK3Q9BYB0 1731 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 IGF2BP3O00425 579 aaKnown RBP eCLIP17.14■□□□□ 0.33
MBD1-222ENST00000590208 UPP2O95045 317 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 PSMD2Q13200 908 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 SBK1Q52WX2 424 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 KRT79Q5XKE5 535 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 REXO1Q8N1G1 1221 aaKnown RBP17.14■□□□□ 0.33
MBD1-222ENST00000590208 FBXO25Q8TCJ0 367 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 MICAL1Q8TDZ2 1067 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 PIGSQ96S52 555 aa17.14■□□□□ 0.33
MBD1-222ENST00000590208 AFF2P51816 1311 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 COL22A1Q8NFW1 1626 aaPredicted RBP17.13■□□□□ 0.33
MBD1-222ENST00000590208 RGS16O15492 202 aaPredicted RBP17.13■□□□□ 0.33
MBD1-222ENST00000590208 GNA11P29992 359 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 IL6STP40189 918 aaPredicted RBP17.13■□□□□ 0.33
MBD1-222ENST00000590208 ZNF211Q13398 564 aaPredicted RBP17.13■□□□□ 0.33
MBD1-222ENST00000590208 LRRC14Q15048 493 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 DCAF12L1Q5VU92 463 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 DPY19L2P1Q6NXN4 242 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 GJB7Q6PEY0 223 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 SLFN11Q7Z7L1 901 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 EPS8L3Q8TE67 593 aaKnown RBP17.13■□□□□ 0.33
MBD1-222ENST00000590208 PABPC3Q9H361 631 aaKnown RBP17.13■□□□□ 0.33
MBD1-222ENST00000590208 SEMA4AQ9H3S1 761 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 STK38LQ9Y2H1 464 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 THRAP3Q9Y2W1 955 aaKnown RBP17.13■□□□□ 0.33
MBD1-222ENST00000590208 IRX1P78414 480 aaPredicted RBP17.13■□□□□ 0.33
MBD1-222ENST00000590208 ZKSCAN8Q15776 578 aaPredicted RBP17.13■□□□□ 0.33
MBD1-222ENST00000590208 SOGA3Q5TF21 947 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 DENND2CQ68D51 928 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 MAEAQ7L5Y9 396 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 ERICH1Q86X53 443 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 NEK9Q8TD19 979 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 SCFD1Q8WVM8 642 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 UBA5Q9GZZ9 404 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 ECT2Q9H8V3 914 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 NOP53Q9NZM5 478 aaKnown RBP17.13■□□□□ 0.33
MBD1-222ENST00000590208 SUCLA2Q9P2R7 463 aaPredicted RBP17.13■□□□□ 0.33
MBD1-222ENST00000590208 PPP1R9AQ9ULJ8 1098 aa17.13■□□□□ 0.33
MBD1-222ENST00000590208 COL5A2P05997 1499 aaPredicted RBP17.13■□□□□ 0.33
MBD1-222ENST00000590208 TAF1P21675 1872 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 ENO4A6NNW6 628 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 H2AFZP0C0S5 128 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 FXR2P51116 673 aaKnown RBP eCLIP17.12■□□□□ 0.33
MBD1-222ENST00000590208 EVA1CP58658 441 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 DR1Q01658 176 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 H2AFVQ71UI9 128 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 ARMC2Q8NEN0 867 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 U2AF1L4Q8WU68 220 aaKnown RBP17.12■□□□□ 0.33
MBD1-222ENST00000590208 CEP63Q96MT8 703 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 ZHX3Q9H4I2 956 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 DBR1Q9UK59 544 aaKnown RBP17.12■□□□□ 0.33
MBD1-222ENST00000590208 TRIM33Q9UPN9 1127 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 NIP7Q9Y221 180 aaKnown RBP eCLIP17.12■□□□□ 0.33
MBD1-222ENST00000590208 CFAP73A6NFT4 308 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 KRT16P08779 473 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 KLRC3Q07444 240 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 TMEM266Q2M3C6 531 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 C10orf76Q5T2E6 689 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 DUPD1Q68J44 220 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 MGARPQ8TDB4 240 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 PGM2Q96G03 612 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 HES6Q96HZ4 224 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 ERP44Q9BS26 406 aa17.12■□□□□ 0.33
MBD1-222ENST00000590208 E9PMD0 336 aa17.11■□□□□ 0.33
MBD1-222ENST00000590208 NUDT17P0C025 328 aa17.11■□□□□ 0.33
MBD1-222ENST00000590208 INHBEP58166 350 aa17.11■□□□□ 0.33
MBD1-222ENST00000590208 UBE4AQ14139 1066 aa17.11■□□□□ 0.33
MBD1-222ENST00000590208 HERC4Q5GLZ8 1057 aaPredicted RBP17.11■□□□□ 0.33
MBD1-222ENST00000590208 AADACL2Q6P093 401 aa17.11■□□□□ 0.33
MBD1-222ENST00000590208 BATF3Q9NR55 127 aa17.11■□□□□ 0.33
MBD1-222ENST00000590208 HDAC9Q9UKV0 1011 aa17.11■□□□□ 0.33
MBD1-222ENST00000590208 PNMA3Q9UL41 463 aa17.11■□□□□ 0.33
MBD1-222ENST00000590208 RTCBQ9Y3I0 505 aaKnown RBP17.11■□□□□ 0.33
MBD1-222ENST00000590208 DAAM1Q9Y4D1 1078 aa17.11■□□□□ 0.33
MBD1-222ENST00000590208 DDX3XO00571 662 aaKnown RBP eCLIP17.11■□□□□ 0.332e-8■■■■□ 25.7
MBD1-222ENST00000590208 SNX3O60493 162 aa17.11■□□□□ 0.33
MBD1-222ENST00000590208 PON1P27169 355 aa17.11■□□□□ 0.33
MBD1-222ENST00000590208 BIRC2Q13490 618 aa17.11■□□□□ 0.33
MBD1-222ENST00000590208 TMEM119Q4V9L6 283 aa17.11■□□□□ 0.33
MBD1-222ENST00000590208 CDCA2Q69YH5 1023 aaPredicted RBP17.11■□□□□ 0.33
MBD1-222ENST00000590208 CAPRIN2Q6IMN6 1127 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms