RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 NIFKQ9BYG3 293 aaKnown RBP15.2■□□□□ 0.02
VMP1-210ENST00000589823 PANK2Q9BZ23 570 aa15.2■□□□□ 0.02
VMP1-210ENST00000589823 SETD4Q9NVD3 440 aa15.2■□□□□ 0.02
VMP1-210ENST00000589823 STK17AQ9UEE5 414 aa15.2■□□□□ 0.02
VMP1-210ENST00000589823 GTF2IRD1Q9UHL9 959 aa15.2■□□□□ 0.02
VMP1-210ENST00000589823 DBR1Q9UK59 544 aaKnown RBP15.2■□□□□ 0.02
VMP1-210ENST00000589823 KCNH3Q9ULD8 1083 aa15.2■□□□□ 0.02
VMP1-210ENST00000589823 PPME1Q9Y570 386 aa15.2■□□□□ 0.02
VMP1-210ENST00000589823 MYH9P35579 1960 aaKnown RBP15.2■□□□□ 0.02
VMP1-210ENST00000589823 SCN10AQ9Y5Y9 1956 aa15.2■□□□□ 0.02
VMP1-210ENST00000589823 GRIN2DO15399 1336 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 MROH7Q68CQ1 1323 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 A0A087WWV3 80 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 TMEM150BA6NC51 233 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 E9PMD0 336 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 ZBTB39O15060 712 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 POLR2DO15514 142 aaKnown RBP15.19■□□□□ 0.02
VMP1-210ENST00000589823 EYA4O95677 639 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 SSBP05455 408 aaKnown RBP eCLIP15.19■□□□□ 0.02
VMP1-210ENST00000589823 RARRES1P49788 294 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 NPEPPSP55786 919 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 UBE2HP62256 183 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 EXOC8Q8IYI6 725 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 IQUBQ8NA54 791 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 BHMT2Q9H2M3 363 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 CYP26B1Q9NR63 512 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 NOD1Q9Y239 953 aa15.19■□□□□ 0.02
VMP1-210ENST00000589823 TLR3O15455 904 aaKnown RBP15.18■□□□□ 0.02
VMP1-210ENST00000589823 MAGEB2O15479 319 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 PLA2G4BP0C869 781 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 RFC5P40937 340 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 SYKP43405 635 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 CDK7P50613 346 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 NDUFA8P51970 172 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 POLGP54098 1239 aaPredicted RBP15.18■□□□□ 0.02
VMP1-210ENST00000589823 TBC1D8BQ0IIM8 1120 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 TARBP2Q15633 366 aaKnown RBP15.18■□□□□ 0.02
VMP1-210ENST00000589823 C1orf53Q5VUE5 145 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 GDF6Q6KF10 455 aaPredicted RBP15.18■□□□□ 0.02
VMP1-210ENST00000589823 KCNK18Q7Z418 384 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 LMBR1Q8WVP7 490 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 TRAPPC12Q8WVT3 735 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 LARP4BQ92615 738 aaKnown RBP15.18■□□□□ 0.02
VMP1-210ENST00000589823 RAD54LQ92698 747 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 DHX58Q96C10 678 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 JPH2Q9BR39 696 aaPredicted RBP15.18■□□□□ 0.02
VMP1-210ENST00000589823 SH2D3AQ9BRG2 576 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 CUEDC2Q9H467 287 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 TUBE1Q9UJT0 475 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 HPSEQ9Y251 543 aa15.18■□□□□ 0.02
VMP1-210ENST00000589823 WDR81Q562E7 1941 aa15.17■□□□□ 0.02
VMP1-210ENST00000589823 A0A087X0B3 334 aa15.17■□□□□ 0.02
VMP1-210ENST00000589823 FAM237AA0A1B0GTK4 181 aa15.17■□□□□ 0.02
VMP1-210ENST00000589823 ZBTB42B2RXF5 422 aa15.17■□□□□ 0.02
VMP1-210ENST00000589823 GADD45BO75293 160 aaPredicted RBP15.17■□□□□ 0.02
VMP1-210ENST00000589823 KLRC1P26715 233 aa15.17■□□□□ 0.02
VMP1-210ENST00000589823 HOXC8P31273 242 aa15.17■□□□□ 0.02
VMP1-210ENST00000589823 MCM6Q14566 821 aa15.17■□□□□ 0.02
VMP1-210ENST00000589823 UBE2Q1Q7Z7E8 422 aa15.17■□□□□ 0.02
VMP1-210ENST00000589823 CEP57L1Q8IYX8 460 aa15.17■□□□□ 0.02
VMP1-210ENST00000589823 RETREG2Q8NC44 543 aa15.17■□□□□ 0.02
VMP1-210ENST00000589823 SLC7A3Q8WY07 619 aa15.17■□□□□ 0.02
VMP1-210ENST00000589823 GOLPH3LQ9H4A5 285 aa15.17■□□□□ 0.02
VMP1-210ENST00000589823 USP25Q9UHP3 1055 aa15.17■□□□□ 0.02
VMP1-210ENST00000589823 DCDC2CA8MYV0 355 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 TREHO43280 583 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 USO1O60763 962 aaKnown RBP15.16■□□□□ 0.02
VMP1-210ENST00000589823 PQBP1O60828 265 aaKnown RBP15.16■□□□□ 0.02
VMP1-210ENST00000589823 DGAT1O75907 488 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 RTP1P59025 263 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 ADAM17P78536 824 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 ZNF200P98182 395 aaPredicted RBP15.16■□□□□ 0.02
VMP1-210ENST00000589823 DHX8Q14562 1220 aaKnown RBP15.16■□□□□ 0.02
VMP1-210ENST00000589823 SNX17Q15036 470 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 PTGISQ16647 500 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 TRIM60Q495X7 471 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 MARCH8Q5T0T0 291 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 MTHFD1LQ6UB35 978 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 SV2BQ7L1I2 683 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 SYT2Q8N9I0 419 aaPredicted RBP15.16■□□□□ 0.02
VMP1-210ENST00000589823 CCDC34Q96HJ3 373 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 MAGEF1Q9HAY2 307 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 BLOC1S4Q9NUP1 217 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 ATP11BQ9Y2G3 1177 aa15.16■□□□□ 0.02
VMP1-210ENST00000589823 MBLAC1A4D2B0 266 aaPredicted RBP15.15■□□□□ 0.02
VMP1-210ENST00000589823 GAS2O43903 313 aaKnown RBP15.15■□□□□ 0.02
VMP1-210ENST00000589823 B4GALT4O60513 344 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 MAFO75444 373 aaPredicted RBP15.15■□□□□ 0.02
VMP1-210ENST00000589823 C22orf31O95567 290 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 CYP2C9P11712 490 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 TMOD1P28289 359 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 MCM4P33991 863 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 DNM2P50570 870 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 SLC12A3P55017 1021 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 FAM160A1Q05DH4 1040 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 HIC1Q14526 733 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 EMC2Q15006 297 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 E2F4Q16254 413 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 LRRC26Q2I0M4 334 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 NAALADL2Q58DX5 795 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms