RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 NPEPPSP55786 919 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 SNW1Q13573 536 aaKnown RBP16.93■□□□□ 0.3
ATG4D-211ENST00000589753 NBPF20Q3BBV1 942 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 MTERF2Q49AM1 385 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 ZNF484Q5JVG2 852 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 CEP57L1Q8IYX8 460 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 C7orf31Q8N865 590 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 CEP170P1Q96L14 293 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 SH2D3AQ9BRG2 576 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 STARD7Q9NQZ5 370 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 CYP26B1Q9NR63 512 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 COL1A2P08123 1366 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 CENPFP49454 3210 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 ARHGEF35A5YM69 484 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 NR1I2O75469 434 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 SSBP05455 408 aaKnown RBP eCLIP16.92■□□□□ 0.3
ATG4D-211ENST00000589753 SLFN14P0C7P3 912 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 PPFIA1Q13136 1202 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 ITGA7Q13683 1181 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 MCM6Q14566 821 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 GRIK4Q16099 956 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 LONRF3Q496Y0 759 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 SYT2Q8N9I0 419 aaPredicted RBP16.92■□□□□ 0.3
ATG4D-211ENST00000589753 PPP1R13LQ8WUF5 828 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 MAGEF1Q9HAY2 307 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 SERTAD1Q9UHV2 236 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 PPME1Q9Y570 386 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 NRCAMQ92823 1304 aa16.92■□□□□ 0.3
ATG4D-211ENST00000589753 SCN10AQ9Y5Y9 1956 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 A0A0U1RQG5 324 aaPredicted RBP16.91■□□□□ 0.3
ATG4D-211ENST00000589753 RRN3P2A6NIE6 340 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 ZBTB42B2RXF5 422 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 ACTN4O43707 911 aaKnown RBP16.91■□□□□ 0.3
ATG4D-211ENST00000589753 SLC12A3P55017 1021 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 IGBP1P78318 339 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 DHX8Q14562 1220 aaKnown RBP16.91■□□□□ 0.3
ATG4D-211ENST00000589753 TARBP2Q15633 366 aaKnown RBP16.91■□□□□ 0.3
ATG4D-211ENST00000589753 FAM47CQ5HY64 1035 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 NFRKBQ6P4R8 1299 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 KRBA2Q6ZNG9 492 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 SV2BQ7L1I2 683 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 CNNM3Q8NE01 707 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 ABHD8Q96I13 439 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 SENP6Q9GZR1 1112 aaPredicted RBP16.91■□□□□ 0.3
ATG4D-211ENST00000589753 SETD4Q9NVD3 440 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 HDAC6Q9UBN7 1215 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 LOXHD1Q8IVV2 1947 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 GRIN2DO15399 1336 aa16.91■□□□□ 0.3
ATG4D-211ENST00000589753 C17orf102A2RUQ5 167 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 KINO60870 393 aaKnown RBP16.9■□□□□ 0.3
ATG4D-211ENST00000589753 MBD3O95983 291 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 COL6A1P12109 1028 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 PTPN11Q06124 597 aaPredicted RBP16.9■□□□□ 0.3
ATG4D-211ENST00000589753 TBC1D8BQ0IIM8 1120 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 PADI6Q6TGC4 694 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 SESTD1Q86VW0 696 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 GPT2Q8TD30 523 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 DIS3LQ8TF46 1054 aaKnown RBP16.9■□□□□ 0.3
ATG4D-211ENST00000589753 LMBR1Q8WVP7 490 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 TRAPPC12Q8WVT3 735 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 TIGD1Q96MW7 591 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 CEP89Q96ST8 783 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 SEZ6LQ9BYH1 1024 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 TNMDQ9H2S6 317 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 C11orf49Q9H6J7 331 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 DACT1Q9NYF0 836 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 GTF2IRD1Q9UHL9 959 aa16.9■□□□□ 0.3
ATG4D-211ENST00000589753 ARID2Q68CP9 1835 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 USO1O60763 962 aaKnown RBP16.89■□□□□ 0.29
ATG4D-211ENST00000589753 DGAT1O75907 488 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 GNAT1P11488 350 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 EN2P19622 333 aaPredicted RBP16.89■□□□□ 0.29
ATG4D-211ENST00000589753 HOXC8P31273 242 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 RFC5P40937 340 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 POLGP54098 1239 aaPredicted RBP16.89■□□□□ 0.29
ATG4D-211ENST00000589753 NFKBIBQ15653 356 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 RINT1Q6NUQ1 792 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 KANK3Q6NY19 840 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 GPBP1Q86WP2 473 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 EXOC8Q8IYI6 725 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 SLC43A3Q8NBI5 491 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 SLC7A3Q8WY07 619 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 CCDC34Q96HJ3 373 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 PAWRQ96IZ0 340 aaKnown RBP16.89■□□□□ 0.29
ATG4D-211ENST00000589753 LRRC27Q9C0I9 530 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 KBTBD4Q9NVX7 518 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 KCND2Q9NZV8 630 aa16.89■□□□□ 0.29
ATG4D-211ENST00000589753 ARVCFO00192 962 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 MAGEB2O15479 319 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 MAFO75444 373 aaPredicted RBP16.88■□□□□ 0.29
ATG4D-211ENST00000589753 C22orf31O95567 290 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 CYP11B2P19099 503 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 KLRC1P26715 233 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 AFMP43652 599 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 AMPD3Q01432 767 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 MARCH8Q5T0T0 291 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 MTHFD1LQ6UB35 978 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 C1orf186Q6ZWK4 172 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 NECAB2Q7Z6G3 386 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 STAMQ92783 540 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms