RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 SRFP11831 508 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 PLS3P13797 630 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 VAV1P15498 845 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 RFC4P35249 363 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 LTBRP36941 435 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 ID4P47928 161 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 KCNJ4P48050 445 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 NEK2P51955 445 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 LMOD3Q0VAK6 560 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 SART3Q15020 963 aaKnown RBP6.85□□□□□ -1.31
SMAD4-208ENST00000589706 PPP2R5AQ15172 486 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 CYP27C1Q4G0S4 372 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 HABP4Q5JVS0 413 aaKnown RBP6.85□□□□□ -1.31
SMAD4-208ENST00000589706 RCSD1Q6JBY9 416 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 ZNF771Q7L3S4 317 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-208ENST00000589706 NME9Q86XW9 330 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 EGFL6Q8IUX8 553 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 KSR1Q8IVT5 923 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 ZC3H7AQ8IWR0 971 aaKnown RBP6.85□□□□□ -1.31
SMAD4-208ENST00000589706 IGSF22Q8N9C0 903 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 GATA6Q92908 595 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 ZNF775Q96BV0 537 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-208ENST00000589706 GPR101Q96P66 508 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-208ENST00000589706 FAM83CQ9BQN1 747 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 CCDC8Q9H0W5 538 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-208ENST00000589706 RAI14Q9P0K7 980 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 GABBR1Q9UBS5 961 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 ABT1Q9ULW3 272 aaKnown RBP6.85□□□□□ -1.31
SMAD4-208ENST00000589706 APOBEC2Q9Y235 224 aaKnown RBP6.85□□□□□ -1.31
SMAD4-208ENST00000589706 CASP8AP2Q9UKL3 1982 aa6.85□□□□□ -1.31
SMAD4-208ENST00000589706 RAB3GAP2Q9H2M9 1393 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 CGNL1Q0VF96 1302 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 CCDC194A0A1B0GVG4 234 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 GNAT3A8MTJ3 354 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 TSPAN6O43657 245 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 MSCO60682 206 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 MAP4K4O95819 1239 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-208ENST00000589706 F2P00734 622 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 PYGMP11217 842 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 ADMP35318 185 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 SATB1Q01826 763 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 GRM1Q13255 1194 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 KCNAB2Q13303 367 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 EEF1DP3Q658K8 133 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 IQCEQ6IPM2 695 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 LBX2Q6XYB7 198 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 ZAR1Q86SH2 424 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 CCDC103Q8IW40 242 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 NXPE1Q8N323 547 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 DIO2Q92813 273 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 CAPNS2Q96L46 248 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 SMAD5Q99717 465 aaKnown RBP6.84□□□□□ -1.31
SMAD4-208ENST00000589706 ALG1Q9BT22 464 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 TRIM8Q9BZR9 551 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 DUSP15Q9H1R2 295 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-208ENST00000589706 PRKRIP1Q9H875 184 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-208ENST00000589706 BSDC1Q9NW68 430 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-208ENST00000589706 CLEC1BQ9P126 229 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 ADAMTS8Q9UP79 889 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 ITGB4P16144 1822 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 RGPD2P0DJD1 1756 aa6.84□□□□□ -1.31
SMAD4-208ENST00000589706 EVC2Q86UK5 1308 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 PCDH11XQ9BZA7 1347 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 PCDH11YQ9BZA8 1340 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 SHTN1A0MZ66 631 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 ZNF891A8MT65 544 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-208ENST00000589706 ZNF205O95201 554 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 HSP90AB1P08238 724 aaKnown RBP6.83□□□□□ -1.32
SMAD4-208ENST00000589706 GSTM1P09488 218 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 SRGAP2CP0DJJ0 459 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 LCP1P13796 627 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 CALRP27797 417 aaKnown RBP6.83□□□□□ -1.32
SMAD4-208ENST00000589706 ECE1P42892 770 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 TBX4P57082 545 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 IL2P60568 153 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 DDR1Q08345 913 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 PAK1Q13153 545 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 NBPF11Q86T75 865 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 WDR75Q8IWA0 830 aaKnown RBP6.83□□□□□ -1.32
SMAD4-208ENST00000589706 CNTROBQ8N137 903 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 CNTD1Q8N815 330 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 PCDH19Q8TAB3 1148 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 COG1Q8WTW3 980 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 RAPGEF4Q8WZA2 1011 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 NCAPGQ9BPX3 1015 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 TRIT1Q9H3H1 467 aaKnown RBP6.83□□□□□ -1.32
SMAD4-208ENST00000589706 TAF1DQ9H5J8 278 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-208ENST00000589706 GPATCH2Q9NW75 528 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 OGFRQ9NZT2 677 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 CHMP5Q9NZZ3 219 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 ASAP1Q9ULH1 1129 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 ZKSCAN5Q9Y2L8 839 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 COQ6Q9Y2Z9 468 aa6.83□□□□□ -1.32
SMAD4-208ENST00000589706 TTC36A6NLP5 189 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 FAM155AB1AL88 458 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-208ENST00000589706 M0R2C6 588 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 TRAF5O00463 557 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 CYP27B1O15528 508 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 CA12O43570 354 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 PRC1O43663 620 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms