RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 SYDE2Q5VT97 1194 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 KCNK18Q7Z418 384 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 COL23A1Q86Y22 540 aaPredicted RBP8.14□□□□□ -1.11
ZNF540-206ENST00000589117 UBXN6Q9BZV1 441 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 LACRTQ9GZZ8 138 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 METTL14Q9HCE5 456 aaKnown RBP8.14□□□□□ -1.11
ZNF540-206ENST00000589117 ARHGEF10LQ9HCE6 1279 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 ABCB6Q9NP58 842 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 MED4Q9NPJ6 270 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 HERC5Q9UII4 1024 aaKnown RBP8.14□□□□□ -1.11
ZNF540-206ENST00000589117 BZW2Q9Y6E2 419 aaKnown RBP8.14□□□□□ -1.11
ZNF540-206ENST00000589117 DNMT3AQ9Y6K1 912 aaPredicted RBP8.14□□□□□ -1.11
ZNF540-206ENST00000589117 QSER1Q2KHR3 1735 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 E9PMD0 336 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 MEIS2O14770 477 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 PPP1R12BO60237 982 aaPredicted RBP8.13□□□□□ -1.11
ZNF540-206ENST00000589117 SASH3O75995 380 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 CYP11B2P19099 503 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 SREBF1P36956 1147 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 OXLD1Q5BKU9 147 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 VARS2Q5ST30 1063 aaKnown RBP8.13□□□□□ -1.11
ZNF540-206ENST00000589117 DACT2Q5SW24 774 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 PDXDC1Q6P996 788 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 TAS1R3Q7RTX0 852 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 SYT2Q8N9I0 419 aaPredicted RBP8.13□□□□□ -1.11
ZNF540-206ENST00000589117 EXOC4Q96A65 974 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 PKNOX2Q96KN3 472 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 SH2D4AQ9H788 454 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 CALCOCO1Q9P1Z2 691 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 ARHGAP20Q9P2F6 1191 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 ZHX1Q9UKY1 873 aaPredicted RBP8.13□□□□□ -1.11
ZNF540-206ENST00000589117 SNX12Q9UMY4 172 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 LTBP1Q14766 1721 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 POTEB3A0JP26 581 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 DDTLA6NHG4 134 aaPredicted RBP8.13□□□□□ -1.11
ZNF540-206ENST00000589117 POTECB2RU33 542 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 BHMG1C9JSJ3 638 aaPredicted RBP8.13□□□□□ -1.11
ZNF540-206ENST00000589117 PJA2O43164 708 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 TBCAO75347 108 aaKnown RBP8.13□□□□□ -1.11
ZNF540-206ENST00000589117 APBA3O96018 575 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 CYP2C19P33261 490 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 CASP8Q14790 479 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 IFI16Q16666 785 aaKnown RBP8.13□□□□□ -1.11
ZNF540-206ENST00000589117 FAM83BQ5T0W9 1011 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 POTEBQ6S5H4 581 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 BTNL9Q6UXG8 535 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 STXBP4Q6ZWJ1 553 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 FRMD5Q7Z6J6 570 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 VPS36Q86VN1 386 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 FMNL3Q8IVF7 1028 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 TPCN2Q8NHX9 752 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 CAPZA3Q96KX2 299 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 PNKPQ96T60 521 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 ARMCX3Q9UH62 379 aaPredicted RBP8.13□□□□□ -1.11
ZNF540-206ENST00000589117 HYOU1Q9Y4L1 999 aa8.13□□□□□ -1.11
ZNF540-206ENST00000589117 FRMD3A2A2Y4 597 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 PDXKO00764 312 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 ICMTO60725 284 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 NDUFB10O96000 172 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 CYP3A4P08684 503 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 XRCC5P13010 732 aaKnown RBP8.12□□□□□ -1.11
ZNF540-206ENST00000589117 GAP43P17677 238 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 NR2F2P24468 414 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 MAPK1P28482 360 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 CIITAP33076 1130 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 HSPA1LP34931 641 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 STAT2P52630 851 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 SLC12A3P55017 1021 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 VSNL1P62760 191 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 KNOP1Q1ED39 458 aaKnown RBP8.12□□□□□ -1.11
ZNF540-206ENST00000589117 USH1GQ495M9 461 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 CATSPER3Q86XQ3 398 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 TRIM59Q8IWR1 403 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 ZFPM1Q8IX07 1006 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 NELFCDQ8IXH7 590 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 NOA1Q8NC60 698 aaKnown RBP8.12□□□□□ -1.11
ZNF540-206ENST00000589117 ETNPPLQ8TBG4 499 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 FAM71BQ8TC56 605 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 GTF3C2Q8WUA4 911 aaPredicted RBP8.12□□□□□ -1.11
ZNF540-206ENST00000589117 CHURC1Q8WUH1 139 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 CSRNP1Q96S65 589 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 MMS19Q96T76 1030 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 POLR3CQ9BUI4 534 aaPredicted RBP8.12□□□□□ -1.11
ZNF540-206ENST00000589117 DNAJC18Q9H819 358 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 PSD3Q9NYI0 1048 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 TBC1D7Q9P0N9 293 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 HDAC6Q9UBN7 1215 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 TRAF3IP3Q9Y228 551 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 ZC3H4Q9UPT8 1303 aaKnown RBP8.12□□□□□ -1.11
ZNF540-206ENST00000589117 RBAK-RBAKDNI3L0D1 243 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 MUTP22033 750 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 MMP14P50281 582 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 CACNB3P54284 484 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 POLR2FP61218 127 aaKnown RBP8.12□□□□□ -1.11
ZNF540-206ENST00000589117 KLHL30Q0D2K2 578 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 CFAP221Q4G0U5 840 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 GLE1Q53GS7 698 aaKnown RBP8.12□□□□□ -1.11
ZNF540-206ENST00000589117 KRT26Q7Z3Y9 468 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 SIX5Q8N196 739 aa8.12□□□□□ -1.11
ZNF540-206ENST00000589117 C1orf216Q8TAB5 229 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms