RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 MYH9P35579 1960 aaKnown RBP13.35□□□□□ -0.27
CCBE1-203ENST00000589116 UBE4BO95155 1302 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 ADGRA2Q96PE1 1338 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 EIF3DO15371 548 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCBE1-203ENST00000589116 MAPK4P31152 587 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 SP2Q02086 613 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 NR1I3Q14994 352 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 KRT31Q15323 416 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 ZNF792Q3KQV3 632 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 ZCWPW2Q504Y3 356 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 STXBP4Q6ZWJ1 553 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 EPM2AIP1Q7L775 607 aaPredicted RBP13.34□□□□□ -0.27
CCBE1-203ENST00000589116 OTUD6AQ7L8S5 288 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 TMC6Q7Z403 805 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 IRF2BP1Q8IU81 584 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 SCFD1Q8WVM8 642 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 INTS13Q9NVM9 706 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 GABBR1Q9UBS5 961 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCBE1-203ENST00000589116 MCM3APO60318 1980 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 RSPH10B2B2RC85 870 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 COBLO75128 1261 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 FARP2O94887 1054 aaPredicted RBP13.34□□□□□ -0.27
CCBE1-203ENST00000589116 RSPH10BP0C881 870 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 PTGS1P23219 599 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 MSNP26038 577 aaKnown RBP13.34□□□□□ -0.27
CCBE1-203ENST00000589116 ADORA2AP29274 412 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 COPB1P53618 953 aaKnown RBP13.34□□□□□ -0.27
CCBE1-203ENST00000589116 LRRC41Q15345 812 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 CCDC144BQ3MJ40 725 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 METTL7BQ6UX53 244 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 CYFIP1Q7L576 1253 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 GLIS3Q8NEA6 775 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 MRPL44Q9H9J2 332 aaKnown RBP13.34□□□□□ -0.27
CCBE1-203ENST00000589116 RTN4Q9NQC3 1192 aaKnown RBP13.34□□□□□ -0.27
CCBE1-203ENST00000589116 TBC1D7Q9P0N9 293 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 NRBP1Q9UHY1 535 aa13.34□□□□□ -0.27
CCBE1-203ENST00000589116 DIS3Q9Y2L1 958 aaKnown RBP13.34□□□□□ -0.27
CCBE1-203ENST00000589116 SYNGAP1Q96PV0 1343 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 IGKV6D-21A0A0A0MT36 114 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 HIP1RO75146 1068 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 TPM2P07951 284 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 MAPTP10636 758 aaKnown RBP13.33□□□□□ -0.28
CCBE1-203ENST00000589116 FKBP3Q00688 224 aaKnown RBP13.33□□□□□ -0.28
CCBE1-203ENST00000589116 MAPK7Q13164 816 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 GRB14Q14449 540 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 EDRF1Q3B7T1 1238 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 SWSAP1Q6NVH7 229 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 GPR142Q7Z601 462 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 FILIP1Q7Z7B0 1213 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 CCDC60Q8IWA6 550 aaPredicted RBP13.33□□□□□ -0.28
CCBE1-203ENST00000589116 MYCT1Q8N699 235 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 CCDC150Q8NCX0 1101 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 DRC1Q96MC2 740 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 FGFBP2Q9BYJ0 223 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 KCTD10Q9H3F6 313 aa13.33□□□□□ -0.28
CCBE1-203ENST00000589116 LARSQ9P2J5 1176 aaKnown RBP13.33□□□□□ -0.28
CCBE1-203ENST00000589116 DDX41Q9UJV9 622 aaKnown RBP13.33□□□□□ -0.28
CCBE1-203ENST00000589116 IGF2BP3O00425 579 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCBE1-203ENST00000589116 BACH1O14867 736 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 ZNF862O60290 1169 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 GGPS1O95749 300 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 PRKCEQ02156 737 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 SREBF2Q12772 1141 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 ALCAMQ13740 583 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 TAF1CQ15572 869 aaPredicted RBP13.32□□□□□ -0.28
CCBE1-203ENST00000589116 KNOP1Q1ED39 458 aaKnown RBP13.32□□□□□ -0.28
CCBE1-203ENST00000589116 XKR9Q5GH70 373 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 XKR3Q5GH77 459 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 SPECC1LQ69YQ0 1117 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 LRRC55Q6ZSA7 311 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 ANO5Q75V66 913 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 ARMCX2Q7L311 632 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 PLEKHH3Q7Z736 793 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 FAM178BQ8IXR5 827 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 ZC3H3Q8IXZ2 948 aaKnown RBP13.32□□□□□ -0.28
CCBE1-203ENST00000589116 SLC17A8Q8NDX2 589 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 ZNF507Q8TCN5 953 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 CNOT6LQ96LI5 555 aaKnown RBP13.32□□□□□ -0.28
CCBE1-203ENST00000589116 CEP63Q96MT8 703 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 BCAS3Q9H6U6 928 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 VTA1Q9NP79 307 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 ZNF302Q9NR11 478 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 TRAF3IP3Q9Y228 551 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 MAFBQ9Y5Q3 323 aaPredicted RBP13.32□□□□□ -0.28
CCBE1-203ENST00000589116 ITIH6Q6UXX5 1313 aa13.32□□□□□ -0.28
CCBE1-203ENST00000589116 SLC15A5A6NIM6 579 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 PDXKO00764 312 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 N4BP3O15049 544 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 USO1O60763 962 aaKnown RBP13.31□□□□□ -0.28
CCBE1-203ENST00000589116 STBD1O95210 358 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 GCNT3O95395 438 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 PBX1P40424 430 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 CASP5P51878 434 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 SP4Q02446 784 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 TTLL4Q14679 1199 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 ODR4Q5SWX8 454 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 FAM160B1Q5W0V3 765 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 MAMDC4Q6UXC1 1216 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 EEPD1Q7L9B9 569 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms