RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 NFIAQ12857 509 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 BZW1Q7L1Q6 419 aaKnown RBP16.97■□□□□ 0.31
TPGS1-202ENST00000588278 ZNF570Q96NI8 536 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 ELAC2Q9BQ52 826 aaKnown RBP16.97■□□□□ 0.31
TPGS1-202ENST00000588278 BLOC1S4Q9NUP1 217 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 NPHP3-ACAD11A0A0J9YXS1 232 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 SART1O43290 800 aaKnown RBP16.97■□□□□ 0.31
TPGS1-202ENST00000588278 PPIP5K2O43314 1243 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 CAND2O75155 1236 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 SHBGP04278 402 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 HNRNPH3P31942 346 aaKnown RBP16.97■□□□□ 0.31
TPGS1-202ENST00000588278 IFFO1Q0D2I5 559 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 PDXDC1Q6P996 788 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 CCDC50Q8IVM0 306 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 SLF2Q8IX21 1173 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 YIPF3Q9GZM5 350 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 ISCUQ9H1K1 167 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 DBNDD1Q9H9R9 158 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 ABCF3Q9NUQ8 709 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 SERPINB13Q9UIV8 391 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 GGA2Q9UJY4 613 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 LAMB2P55268 1798 aa16.97■□□□□ 0.31
TPGS1-202ENST00000588278 TTI1O43156 1089 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 TNNC1P63316 161 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 RAPGEF1Q13905 1077 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 ECM1Q16610 540 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 KIAA0825Q8IV33 1275 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 FAM114A1Q8IWE2 563 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 ZFPM1Q8IX07 1006 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 KCNV2Q8TDN2 545 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 PNMA5Q96PV4 448 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 CCT8L1PA6NM43 557 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 AP1G2O75843 785 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 LCA5LO95447 670 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 MEI1Q5TIA1 1274 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 SEPT12Q8IYM1 358 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 CERS5Q8N5B7 392 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 FAM133AQ8N9E0 248 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 C7orf25Q9BPX7 421 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 TRIM51Q9BSJ1 452 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 JMJD4Q9H9V9 463 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 GOPCQ9HD26 462 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 DDX25Q9UHL0 483 aaKnown RBP16.96■□□□□ 0.31
TPGS1-202ENST00000588278 STK38LQ9Y2H1 464 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 CCDC88AQ3V6T2 1871 aa16.96■□□□□ 0.31
TPGS1-202ENST00000588278 ROBO3Q96MS0 1386 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 E9PMD0 336 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 TRAF5O00463 557 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 PJA2O43164 708 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 PPP1R11O60927 126 aaPredicted RBP16.95■□□□□ 0.3
TPGS1-202ENST00000588278 IL1R1P14778 569 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 CHN1P15882 459 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 KCNMA1Q12791 1236 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 FIGNQ5HY92 759 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 CHMP6Q96FZ7 201 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 TNRC6CQ9HCJ0 1690 aaKnown RBP16.95■□□□□ 0.3
TPGS1-202ENST00000588278 KRT18P05783 430 aaKnown RBP16.95■□□□□ 0.3
TPGS1-202ENST00000588278 STAT3P40763 770 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 USH1GQ495M9 461 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 CCDC197Q8NCU1 140 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 KIAA1551Q9HCM1 1747 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 SLCO1A2P46721 670 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 LRRC34Q8IZ02 419 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 TAF4BQ92750 862 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 XPO6Q96QU8 1125 aaKnown RBP16.95■□□□□ 0.3
TPGS1-202ENST00000588278 RAB34Q9BZG1 259 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 PSTPIP2Q9H939 334 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 PCDHA12Q9UN75 941 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 KIAA1024Q9UPX6 916 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 TRPC6Q9Y210 931 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 C15orf41Q9Y2V0 281 aa16.95■□□□□ 0.3
TPGS1-202ENST00000588278 PPEF1O14829 653 aaPredicted RBP16.94■□□□□ 0.3
TPGS1-202ENST00000588278 DNAJC8O75937 253 aaPredicted RBP16.94■□□□□ 0.3
TPGS1-202ENST00000588278 TTLL1O95922 423 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 MMEP08473 750 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 SNX1Q13596 522 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 LACTB2Q53H82 288 aaPredicted RBP16.94■□□□□ 0.3
TPGS1-202ENST00000588278 THEMIS2Q5TEJ8 643 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 PSMD1Q99460 953 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 CCDC113Q9H0I3 377 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 CUEDC2Q9H467 287 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 RIOX1Q9H6W3 641 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 COL5A3P25940 1745 aaPredicted RBP16.94■□□□□ 0.3
TPGS1-202ENST00000588278 C5orf60A6NFR6 353 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 BBOX1O75936 387 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 MYL1P05976 194 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 VIMP08670 466 aaKnown RBP16.94■□□□□ 0.3
TPGS1-202ENST00000588278 GRIK3Q13003 919 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 NAB2Q15742 525 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 RUFY4Q6ZNE9 571 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 GJD4Q96KN9 370 aaPredicted RBP16.94■□□□□ 0.3
TPGS1-202ENST00000588278 LSM14BQ9BX40 385 aaKnown RBP16.94■□□□□ 0.3
TPGS1-202ENST00000588278 FGFBP2Q9BYJ0 223 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 ARHGEF10LQ9HCE6 1279 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 TRIM33Q9UPN9 1127 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 NR2E1Q9Y466 385 aa16.94■□□□□ 0.3
TPGS1-202ENST00000588278 MEIS1O00470 390 aa16.93■□□□□ 0.3
TPGS1-202ENST00000588278 RPS6KA1Q15418 735 aa16.93■□□□□ 0.3
TPGS1-202ENST00000588278 SLC9C1Q4G0N8 1177 aa16.93■□□□□ 0.3
TPGS1-202ENST00000588278 CCDC38Q502W7 563 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms