RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CLP1Q92989 425 aaKnown RBP16.25■□□□□ 0.19
VMP1-206ENST00000587945 GJA10Q969M2 543 aa16.25■□□□□ 0.19
VMP1-206ENST00000587945 TCEAL9Q9UHQ7 104 aa16.25■□□□□ 0.19
VMP1-206ENST00000587945 NOC2LQ9Y3T9 749 aaKnown RBP16.25■□□□□ 0.19
VMP1-206ENST00000587945 SAMM50Q9Y512 469 aa16.25■□□□□ 0.19
VMP1-206ENST00000587945 PCDHA10Q9Y5I2 948 aa16.25■□□□□ 0.19
VMP1-206ENST00000587945 COL1A2P08123 1366 aa16.25■□□□□ 0.19
VMP1-206ENST00000587945 C5orf67F2Z3F1 127 aa16.24■□□□□ 0.19
VMP1-206ENST00000587945 H3BQ06 376 aaPredicted RBP16.24■□□□□ 0.19
VMP1-206ENST00000587945 MSH4O15457 936 aa16.24■□□□□ 0.19
VMP1-206ENST00000587945 MGEA5O60502 916 aa16.24■□□□□ 0.19
VMP1-206ENST00000587945 RB1P06400 928 aa16.24■□□□□ 0.19
VMP1-206ENST00000587945 KIZQ2M2Z5 673 aa16.24■□□□□ 0.19
VMP1-206ENST00000587945 LEXMQ3ZCV2 418 aa16.24■□□□□ 0.19
VMP1-206ENST00000587945 EP400NLQ6ZTU2 488 aa16.24■□□□□ 0.19
VMP1-206ENST00000587945 SMAP1Q8IYB5 467 aaPredicted RBP16.24■□□□□ 0.19
VMP1-206ENST00000587945 METTL13Q8N6R0 699 aa16.24■□□□□ 0.19
VMP1-206ENST00000587945 BBXQ8WY36 941 aaPredicted RBP16.24■□□□□ 0.19
VMP1-206ENST00000587945 AIFM3Q96NN9 605 aa16.24■□□□□ 0.19
VMP1-206ENST00000587945 C11orf84Q9BUA3 381 aaPredicted RBP16.24■□□□□ 0.19
VMP1-206ENST00000587945 NSUN3Q9H649 340 aaKnown RBP16.24■□□□□ 0.19
VMP1-206ENST00000587945 ERVK-5Q9HDB9 667 aa16.24■□□□□ 0.19
VMP1-206ENST00000587945 SH3GLB2Q9NR46 395 aa16.24■□□□□ 0.19
VMP1-206ENST00000587945 MRPL42Q9Y6G3 142 aaKnown RBP16.24■□□□□ 0.19
VMP1-206ENST00000587945 TCF20Q9UGU0 1960 aaKnown RBP16.24■□□□□ 0.19
VMP1-206ENST00000587945 CPLX1O14810 134 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 CHMP2AO43633 222 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 DTNBO60941 627 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 RPS6KA5O75582 802 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 VTNP04004 478 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 TRIM22Q8IYM9 498 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 TBCKQ8TEA7 893 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 ZNF274Q96GC6 653 aaPredicted RBP16.23■□□□□ 0.19
VMP1-206ENST00000587945 OSMRQ99650 979 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 TM6SF1Q9BZW5 370 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 ALG13Q9NP73 1137 aaKnown RBP16.23■□□□□ 0.19
VMP1-206ENST00000587945 CD320Q9NPF0 282 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 DISC1Q9NRI5 854 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 RAPGEFL1Q9UHV5 662 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 PCDHA4Q9UN74 947 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 ST3GAL5Q9UNP4 418 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 RWDD3Q9Y3V2 267 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 COL4A6Q14031 1691 aa16.23■□□□□ 0.19
VMP1-206ENST00000587945 SIP14410 1827 aa16.22■□□□□ 0.19
VMP1-206ENST00000587945 WDR64B1ANS9 1081 aa16.22■□□□□ 0.19
VMP1-206ENST00000587945 EPB41L2O43491 1005 aaKnown RBP16.22■□□□□ 0.19
VMP1-206ENST00000587945 ZNF862O60290 1169 aa16.22■□□□□ 0.19
VMP1-206ENST00000587945 STAG3L1P0CL83 205 aa16.22■□□□□ 0.19
VMP1-206ENST00000587945 IL9P15248 144 aa16.22■□□□□ 0.19
VMP1-206ENST00000587945 COL9A1P20849 921 aa16.22■□□□□ 0.19
VMP1-206ENST00000587945 USP11P51784 963 aa16.22■□□□□ 0.19
VMP1-206ENST00000587945 CLCN3P51790 818 aa16.22■□□□□ 0.19
VMP1-206ENST00000587945 UGCGQ16739 394 aa16.22■□□□□ 0.19
VMP1-206ENST00000587945 CMTR2Q8IYT2 770 aaKnown RBP16.22■□□□□ 0.19
VMP1-206ENST00000587945 KHSRPQ92945 711 aaKnown RBP eCLIP16.22■□□□□ 0.19
VMP1-206ENST00000587945 ADAM2Q99965 735 aa16.22■□□□□ 0.19
VMP1-206ENST00000587945 UNC45AQ9H3U1 944 aa16.22■□□□□ 0.19
VMP1-206ENST00000587945 EPHX3Q9H6B9 360 aa16.22■□□□□ 0.19
VMP1-206ENST00000587945 PDRG1Q9NUG6 133 aa16.22■□□□□ 0.19
VMP1-206ENST00000587945 LRFN2Q9ULH4 789 aa16.22■□□□□ 0.19
VMP1-206ENST00000587945 GAS7O60861 476 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 GPR32O75388 356 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 DEXIO95424 95 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 TDP2O95551 362 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 SARSP49591 514 aaKnown RBP16.21■□□□□ 0.19
VMP1-206ENST00000587945 CRYBB1P53674 252 aaPredicted RBP16.21■□□□□ 0.19
VMP1-206ENST00000587945 NPY5RQ15761 445 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 LRCH2Q5VUJ6 765 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 PTCRAQ6ISU1 281 aaPredicted RBP16.21■□□□□ 0.19
VMP1-206ENST00000587945 FAM228AQ86W67 206 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 BLIDQ8IZY5 108 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 LRRC71Q8N4P6 559 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 NEK9Q8TD19 979 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 SLC5A5Q92911 643 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 PABPC5Q96DU9 382 aaKnown RBP16.21■□□□□ 0.19
VMP1-206ENST00000587945 ZNF668Q96K58 619 aaPredicted RBP16.21■□□□□ 0.19
VMP1-206ENST00000587945 LMAN2LQ9H0V9 348 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 CLDND1Q9NY35 253 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 PLAGL2Q9UPG8 496 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 PCDHB7Q9Y5E2 793 aa16.21■□□□□ 0.19
VMP1-206ENST00000587945 KAT6AQ92794 2004 aa16.21■□□□□ 0.18
VMP1-206ENST00000587945 DENND3A2RUS2 1198 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 M0R2N6 131 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 OATP04181 439 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 NEFLP07196 543 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 DNAJB1P25685 340 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 GTF2F1P35269 517 aaKnown RBP eCLIP16.2■□□□□ 0.18
VMP1-206ENST00000587945 PRKCEQ02156 737 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 HYAL1Q12794 435 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 CAMK1Q14012 370 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 FAM102BQ5T8I3 360 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 EFCAB12Q6NXP0 572 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 FAM167AQ96KS9 214 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 RIT2Q99578 217 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 PLVAPQ9BX97 442 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 TEKT3Q9BXF9 490 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 RGS18Q9NS28 235 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 KCNJ14Q9UNX9 436 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 CEP131Q9UPN4 1083 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 AKT3Q9Y243 479 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms