RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 KLC2Q9H0B6 622 aa6.31□□□□□ -1.4
VMP1-205ENST00000587470 KCNH7Q9NS40 1196 aa6.31□□□□□ -1.4
VMP1-205ENST00000587470 TSC22D4Q9Y3Q8 395 aa6.31□□□□□ -1.4
VMP1-205ENST00000587470 PTCH2Q9Y6C5 1203 aa6.31□□□□□ -1.4
VMP1-205ENST00000587470 DNMBPQ6XZF7 1577 aa6.31□□□□□ -1.4
VMP1-205ENST00000587470 TCRBV16S1A1N1A0A5B0 115 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 SCDO00767 359 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 MATN3O15232 486 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 ZNF623O75123 536 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 ETV4P43268 484 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 RANGAP1P46060 587 aaPredicted RBP6.3□□□□□ -1.4
VMP1-205ENST00000587470 IL13RA1P78552 427 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 STILQ15468 1287 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 ZMAT1Q5H9K5 638 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 OVCH1Q7RTY7 1134 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 BRAPQ7Z569 592 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 WDR48Q8TAF3 677 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 SCYL1Q96KG9 808 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 DNAJC2Q99543 621 aaKnown RBP6.3□□□□□ -1.4
VMP1-205ENST00000587470 ZDHHC5Q9C0B5 715 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 OSBPL2Q9H1P3 480 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 NCOA5Q9HCD5 579 aaKnown RBP6.3□□□□□ -1.4
VMP1-205ENST00000587470 PTPN22Q9Y2R2 807 aa6.3□□□□□ -1.4
VMP1-205ENST00000587470 SLC12A8A0AV02 714 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 SOGA1O94964 1423 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 KCNA6P17658 529 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 MC4RP32245 332 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 ECE1P42892 770 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 RAC3P60763 192 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 NFE2L2Q16236 605 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 ZNF585AQ6P3V2 769 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 FGD2Q7Z6J4 655 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 Q8TCH9 128 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 WWC2-AS2Q96NR7 200 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 GNRHR2Q96P88 292 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 LRRC37BQ96QE4 947 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 SEMA4AQ9H3S1 761 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 TRIM39Q9HCM9 518 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 UCKL1Q9NWZ5 548 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 CDK11AQ9UQ88 783 aaPredicted RBP6.29□□□□□ -1.4
VMP1-205ENST00000587470 TCAF1Q9Y4C2 921 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 B3GALT1Q9Y5Z6 326 aa6.29□□□□□ -1.4
VMP1-205ENST00000587470 PLD2O14939 933 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 AKAP8O43823 692 aaKnown RBP6.28□□□□□ -1.4
VMP1-205ENST00000587470 MPIG6BO95866 241 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 MMEP08473 750 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 SELENOPP49908 381 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 EIF4HQ15056 248 aaKnown RBP6.28□□□□□ -1.4
VMP1-205ENST00000587470 CDSNQ15517 529 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 TCTN3Q6NUS6 607 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 ABHD17CQ6PCB6 329 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 NPM2Q86SE8 214 aaKnown RBP6.28□□□□□ -1.4
VMP1-205ENST00000587470 C2orf69Q8N8R5 385 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 IGSF22Q8N9C0 903 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 GIMAP8Q8ND71 665 aaPredicted RBP6.28□□□□□ -1.4
VMP1-205ENST00000587470 SH3RF3Q8TEJ3 882 aaPredicted RBP6.28□□□□□ -1.4
VMP1-205ENST00000587470 SREK1Q8WXA9 508 aaKnown RBP6.28□□□□□ -1.4
VMP1-205ENST00000587470 ASB15Q8WXK1 588 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 DLG3Q92796 817 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 NEIL1Q96FI4 390 aaPredicted RBP6.28□□□□□ -1.4
VMP1-205ENST00000587470 GBP4Q96PP9 640 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 AMNQ9BXJ7 453 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 ASB1Q9Y576 335 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 WDR97A6NE52 1622 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 POLA1P09884 1462 aaPredicted RBP6.28□□□□□ -1.4
VMP1-205ENST00000587470 GRIN2BQ13224 1484 aa6.28□□□□□ -1.4
VMP1-205ENST00000587470 FOXP2O15409 715 aa6.27□□□□□ -1.41
VMP1-205ENST00000587470 HIP1RO75146 1068 aa6.27□□□□□ -1.41
VMP1-205ENST00000587470 HMGCRP04035 888 aa6.27□□□□□ -1.41
VMP1-205ENST00000587470 SDHAP31040 664 aa6.27□□□□□ -1.41
VMP1-205ENST00000587470 ADCY8P40145 1251 aa6.27□□□□□ -1.41
VMP1-205ENST00000587470 TM4SF20Q53R12 229 aa6.27□□□□□ -1.41
VMP1-205ENST00000587470 TMEM177Q53S58 311 aa6.27□□□□□ -1.41
VMP1-205ENST00000587470 HS1BP3Q53T59 392 aa6.27□□□□□ -1.41
VMP1-205ENST00000587470 TAX1BP1Q86VP1 789 aa6.27□□□□□ -1.41
VMP1-205ENST00000587470 OR10A5Q9H207 317 aa6.27□□□□□ -1.41
VMP1-205ENST00000587470 RAD54L2Q9Y4B4 1467 aa6.27□□□□□ -1.41
VMP1-205ENST00000587470 CUX1P39880 1505 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 PRAMEF22A3QJZ6 481 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 B4E1Z4 1266 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 GOLGA6L22H0YM25 854 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 FOXS1O43638 330 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 KCNQ1P51787 676 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 RRADP55042 308 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 ZXDAP98168 799 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 CD83Q01151 205 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 TMEM132BQ14DG7 1078 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 ARHGAP44Q17R89 818 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 RNF151Q2KHN1 245 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 KANK2Q63ZY3 851 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 LRSAM1Q6UWE0 723 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 OTOP2Q7RTS6 562 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 HIPK4Q8NE63 616 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 ZFR2Q9UPR6 939 aaKnown RBP6.26□□□□□ -1.41
VMP1-205ENST00000587470 TESMINQ9Y4I5 508 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 DIP2BQ9P265 1576 aa6.26□□□□□ -1.41
VMP1-205ENST00000587470 A0A0G2JNJ9 132 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 MUSKO15146 869 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 RAPGEF3O95398 923 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 CR2P20023 1033 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms