RNA–Protein interactions for RNA: ENST00000587440.1

LDLRAD4-209, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-209ENST00000587440 ABHD17CQ6PCB6 329 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 USP53Q70EK8 1073 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 CCDC103Q8IW40 242 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 SPACA3Q8IXA5 215 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 MFSD4AQ8N468 514 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 USP38Q8NB14 1042 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 FRS2Q8WU20 508 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 ZNF622Q969S3 477 aaKnown RBP eCLIP4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 FCRL3Q96P31 734 aaPredicted RBP4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 DBNDD2Q9BQY9 259 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 GPR62Q9BZJ7 368 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 DUSP15Q9H1R2 295 aaPredicted RBP4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 GPRC5CQ9NQ84 441 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 GPRC5DQ9NZD1 345 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 STOML1Q9UBI4 398 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 TMEFF2Q9UIK5 374 aaPredicted RBP4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 KCNH3Q9ULD8 1083 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 CD163L1Q9NR16 1453 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 KDRP35968 1356 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 KIF24Q5T7B8 1368 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 RAB3GAP2Q9H2M9 1393 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 NCOR2Q9Y618 2525 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 TCRBV16S1A1N1A0A5B0 115 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 EFCAB14O75071 495 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 CRTAMO95727 393 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 CPP00450 1065 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 GSNP06396 782 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 GJB1P08034 283 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 ITIH2P19823 946 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 MAGEA10P43363 369 aaPredicted RBP4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 NFKB2Q00653 900 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 NFIAQ12857 509 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 GAB4Q2WGN9 574 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 BRDTQ58F21 947 aaPredicted RBP4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 NKAPLQ5M9Q1 402 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 LHFPL2Q6ZUX7 228 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 MAMDC2Q7Z304 686 aaPredicted RBP4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 RTKN2Q8IZC4 609 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 FAM181AQ8N9Y4 354 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 DAGLBQ8NCG7 672 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 CCDC140Q96MF4 163 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 SLC12A9Q9BXP2 914 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 METTL14Q9HCE5 456 aaKnown RBP4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 ZNF277Q9NRM2 450 aaPredicted RBP4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 HOMER2Q9NSB8 354 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 GTF2IRD1Q9UHL9 959 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 PLAGL2Q9UPG8 496 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 NPFFR2Q9Y5X5 522 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 DMXL1Q9Y485 3027 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 ANKRD31Q8N7Z5 1873 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 DNAH12Q6ZR08 3092 aa4.3□□□□□ -1.72
LDLRAD4-209ENST00000587440 PTPRZ1P23471 2315 aaPredicted RBP4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 ZNF462Q96JM2 2506 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 ALPK3Q96L96 1907 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 PCDH11XQ9BZA7 1347 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 PCDH11YQ9BZA8 1340 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 CACNA1SQ13698 1873 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 MSCO60682 206 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 KPNA6O60684 536 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 ZNF205O95201 554 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 ASLP04424 464 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 H2AFB1P0C5Y9 115 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 H2AFB2P0C5Z0 115 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 JMJD7P0C870 316 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 LCP1P13796 627 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 DEKP35659 375 aaKnown RBP4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 IGFALSP35858 605 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 ID4P47928 161 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 EIF5P55010 431 aaKnown RBP4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 POU4F1Q01851 419 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 TESK1Q15569 626 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 RSPO4Q2I0M5 234 aaPredicted RBP4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 SKOR2Q2VWA4 1001 aaPredicted RBP4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 CT47A1Q5JQC4 288 aaPredicted RBP4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 RTP2Q5QGT7 225 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 ACBD5Q5T8D3 534 aaPredicted RBP4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 MBLAC2Q68D91 279 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 FERMT3Q86UX7 667 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 LURAP1LQ8IV03 231 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 PPIL6Q8IXY8 311 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 PPM1KQ8N3J5 372 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 FBXL6Q8N531 539 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 ZNF655Q8N720 491 aaPredicted RBP4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 GIMAP7Q8NHV1 300 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 TCTN2Q96GX1 697 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 PHF20Q9BVI0 1012 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 BRIP1Q9BX63 1249 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 R3HDMLQ9H3Y0 253 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 MKNK2Q9HBH9 465 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 PCDHA9Q9Y5H5 950 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 BACE2Q9Y5Z0 518 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 USP24Q9UPU5 2620 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 USP9XQ93008 2570 aaPredicted RBP4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 COL4A5P29400 1685 aa4.29□□□□□ -1.72
LDLRAD4-209ENST00000587440 GCN1Q92616 2671 aaKnown RBP4.28□□□□□ -1.72
LDLRAD4-209ENST00000587440 SMG1Q96Q15 3661 aaKnown RBP4.28□□□□□ -1.72
LDLRAD4-209ENST00000587440 CARMIL3Q8ND23 1372 aa4.28□□□□□ -1.72
LDLRAD4-209ENST00000587440 ZFHX2Q9C0A1 2572 aaPredicted RBP4.28□□□□□ -1.72
LDLRAD4-209ENST00000587440 VPS13AQ96RL7 3174 aa4.28□□□□□ -1.72
LDLRAD4-209ENST00000587440 MYH14Q7Z406 1995 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms