RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 PKD2L1Q9P0L9 805 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 ORC3Q9UBD5 711 aaPredicted RBP8.89□□□□□ -0.99
VMP1-204ENST00000587259 MUTYHQ9UIF7 546 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 BRPF3Q9ULD4 1205 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 PCDHGC5Q9Y5F6 944 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 PIEZO1Q92508 2521 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 EMSYQ7Z589 1322 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 PALM3A6NDB9 673 aaPredicted RBP8.88□□□□□ -0.99
VMP1-204ENST00000587259 GCOM1H8Y6P7 765 aaPredicted RBP8.88□□□□□ -0.99
VMP1-204ENST00000587259 NOP56O00567 594 aaKnown RBP8.88□□□□□ -0.99
VMP1-204ENST00000587259 DCXO43602 365 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 JAK2O60674 1132 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 TBX10O75333 385 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 PRPF40AO75400 957 aaKnown RBP8.88□□□□□ -0.99
VMP1-204ENST00000587259 LETM1O95202 739 aaPredicted RBP8.88□□□□□ -0.99
VMP1-204ENST00000587259 POLR2MP0CAP2 368 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 IFNAR1P17181 557 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 MARK3P27448 753 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 IRS1P35568 1242 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 MRE11P49959 708 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 AKAP17AQ02040 695 aaKnown RBP8.88□□□□□ -0.99
VMP1-204ENST00000587259 NHLH1Q02575 133 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 SSRP1Q08945 709 aaKnown RBP8.88□□□□□ -0.99
VMP1-204ENST00000587259 COL9A3Q14050 684 aaPredicted RBP8.88□□□□□ -0.99
VMP1-204ENST00000587259 PTPROQ16827 1216 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 FAM177A1Q8N128 213 aaPredicted RBP8.88□□□□□ -0.99
VMP1-204ENST00000587259 CTCFLQ8NI51 663 aaPredicted RBP8.88□□□□□ -0.99
VMP1-204ENST00000587259 LMBR1Q8WVP7 490 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 PABPC5Q96DU9 382 aaKnown RBP8.88□□□□□ -0.99
VMP1-204ENST00000587259 GPR20Q99678 358 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 MYL10Q9BUA6 226 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 RNF26Q9BY78 433 aaPredicted RBP8.88□□□□□ -0.99
VMP1-204ENST00000587259 NSUN3Q9H649 340 aaKnown RBP8.88□□□□□ -0.99
VMP1-204ENST00000587259 ALG13Q9NP73 1137 aaKnown RBP8.88□□□□□ -0.99
VMP1-204ENST00000587259 TRIOO75962 3097 aa8.88□□□□□ -0.99
VMP1-204ENST00000587259 GOLGA6L4A6NEF3 574 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 DEXIO95424 95 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 CTDNEP1O95476 244 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 DNAJB1P25685 340 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 GNAQP50148 359 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 GATMP50440 423 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 ADAM17P78536 824 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 RBM10P98175 930 aaKnown RBP8.87□□□□□ -0.99
VMP1-204ENST00000587259 GHRHRQ02643 423 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 RESTQ13127 1097 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 LPIN1Q14693 890 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 GRM4Q14833 912 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 SAFBQ15424 915 aaKnown RBP eCLIP8.87□□□□□ -0.99
VMP1-204ENST00000587259 TIGD5Q53EQ6 642 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 FOXD4L5Q5VV16 416 aaPredicted RBP8.87□□□□□ -0.99
VMP1-204ENST00000587259 USP17L6PQ6QN14 398 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 ADGRD2Q7Z7M1 963 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 RAB11FIP4Q86YS3 637 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 FIBCD1Q8N539 461 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 FBXO18Q8NFZ0 1043 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 LINC01599Q8WXQ3 324 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 FOXD4L4Q8WXT5 416 aaPredicted RBP8.87□□□□□ -0.99
VMP1-204ENST00000587259 NCOA5Q9HCD5 579 aaKnown RBP8.87□□□□□ -0.99
VMP1-204ENST00000587259 ARIH1Q9Y4X5 557 aaPredicted RBP8.87□□□□□ -0.99
VMP1-204ENST00000587259 COL4A6Q14031 1691 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 NLRC5Q86WI3 1866 aa8.87□□□□□ -0.99
VMP1-204ENST00000587259 hCG_1642624A0A1W2PR95 340 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 GOLGA6L3A6NEY3 463 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 SPATA31C2B4DYI2 1134 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 FIBPO43427 364 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 ATP9AO75110 1047 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 ALADP13716 330 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 DEKP35659 375 aaKnown RBP8.86□□□□□ -0.99
VMP1-204ENST00000587259 IGBP1P78318 339 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 DNM1Q05193 864 aaKnown RBP8.86□□□□□ -0.99
VMP1-204ENST00000587259 TMEM62Q0P6H9 643 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 GNL2Q13823 731 aaKnown RBP8.86□□□□□ -0.99
VMP1-204ENST00000587259 CAMK1Q14012 370 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 COL19A1Q14993 1142 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 PAN2Q504Q3 1202 aaKnown RBP8.86□□□□□ -0.99
VMP1-204ENST00000587259 METTL7BQ6UX53 244 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 ADHFE1Q8IWW8 467 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 CMTR1Q8N1G2 835 aaKnown RBP8.86□□□□□ -0.99
VMP1-204ENST00000587259 FANCBQ8NB91 859 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 DNAJB3Q8WWF6 145 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 SPATA32Q96LK8 384 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 INPP4AQ96PE3 977 aaPredicted RBP8.86□□□□□ -0.99
VMP1-204ENST00000587259 LZTS2Q9BRK4 669 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 RIOX1Q9H6W3 641 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 AGO3Q9H9G7 860 aaKnown RBP8.86□□□□□ -0.99
VMP1-204ENST00000587259 BRMS1Q9HCU9 246 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 LHX6Q9UPM6 363 aa8.86□□□□□ -0.99
VMP1-204ENST00000587259 ADGRA3Q8IWK6 1321 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 PNMA6FA0A0J9YX94 578 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 ENPP3O14638 875 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 MBTPS2O43462 519 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 TGFB3P10600 412 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 CD52P31358 61 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 TCF7P36402 384 aaPredicted RBP8.85□□□□□ -0.99
VMP1-204ENST00000587259 BMPR1AP36894 532 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 ZNF445P59923 1031 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 MGAT3Q09327 533 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 NTRK3Q16288 839 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 CTC1Q2NKJ3 1217 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 FAM26DQ5JW98 314 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms