RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 C5orf67F2Z3F1 127 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 ENPP3O14638 875 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 DHX15O43143 795 aaKnown RBP12.71□□□□□ -0.37
ACTN4-209ENST00000586538 RPS6KA5O75582 802 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 CD52P31358 61 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 CTNNB1P35222 781 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 CDC42EP1Q00587 391 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 GPM6BQ13491 265 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 BTG3Q14201 252 aaPredicted RBP12.71□□□□□ -0.37
ACTN4-209ENST00000586538 NONOQ15233 471 aaKnown RBP eCLIP12.71□□□□□ -0.37
ACTN4-209ENST00000586538 PUS10Q3MIT2 529 aaKnown RBP12.71□□□□□ -0.37
ACTN4-209ENST00000586538 NAALADL2Q58DX5 795 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 LRCH2Q5VUJ6 765 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 KRT25Q7Z3Z0 450 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 BLIDQ8IZY5 108 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 TBCKQ8TEA7 893 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 NCOA5Q9HCD5 579 aaKnown RBP12.71□□□□□ -0.37
ACTN4-209ENST00000586538 BRMS1Q9HCU9 246 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 DISC1Q9NRI5 854 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 PADI3Q9ULW8 664 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 FAM50BQ9Y247 325 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 NLRC5Q86WI3 1866 aa12.71□□□□□ -0.37
ACTN4-209ENST00000586538 STK36Q9NRP7 1315 aa12.7□□□□□ -0.38
ACTN4-209ENST00000586538 DENND3A2RUS2 1198 aa12.7□□□□□ -0.38
ACTN4-209ENST00000586538 DKC1O60832 514 aaKnown RBP eCLIP12.7□□□□□ -0.38
ACTN4-209ENST00000586538 CRYBB1P53674 252 aaPredicted RBP12.7□□□□□ -0.38
ACTN4-209ENST00000586538 Q4G0T1 1027 aa12.7□□□□□ -0.38
ACTN4-209ENST00000586538 CMTR2Q8IYT2 770 aaKnown RBP12.7□□□□□ -0.38
ACTN4-209ENST00000586538 METTL13Q8N6R0 699 aa12.7□□□□□ -0.38
ACTN4-209ENST00000586538 RASGRP4Q8TDF6 673 aa12.7□□□□□ -0.38
ACTN4-209ENST00000586538 TRAPPC12Q8WVT3 735 aa12.7□□□□□ -0.38
ACTN4-209ENST00000586538 UPF3BQ9BZI7 483 aaKnown RBP12.7□□□□□ -0.38
ACTN4-209ENST00000586538 NSUN3Q9H649 340 aaKnown RBP12.7□□□□□ -0.38
ACTN4-209ENST00000586538 GABBR1Q9UBS5 961 aa12.7□□□□□ -0.38
ACTN4-209ENST00000586538 GINS2Q9Y248 185 aa12.7□□□□□ -0.38
ACTN4-209ENST00000586538 CCDC194A0A1B0GVG4 234 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 FSD2A1L4K1 749 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 MSH4O15457 936 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 HOXA2O43364 376 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 DGKIO75912 1065 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 C22orf31O95567 290 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 OATP04181 439 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 CENPBP07199 599 aaPredicted RBP12.69□□□□□ -0.38
ACTN4-209ENST00000586538 GCFC2P16383 781 aaKnown RBP12.69□□□□□ -0.38
ACTN4-209ENST00000586538 BMPR1AP36894 532 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 TMEM62Q0P6H9 643 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 NFX1Q12986 1120 aaKnown RBP12.69□□□□□ -0.38
ACTN4-209ENST00000586538 STK3Q13188 491 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 MIER3Q7Z3K6 550 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 EXOC8Q8IYI6 725 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 BANK1Q8NDB2 785 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 CLP1Q92989 425 aaKnown RBP12.69□□□□□ -0.38
ACTN4-209ENST00000586538 P2RX5Q93086 422 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 ZNF689Q96CS4 500 aaPredicted RBP12.69□□□□□ -0.38
ACTN4-209ENST00000586538 JPH2Q9BR39 696 aaPredicted RBP12.69□□□□□ -0.38
ACTN4-209ENST00000586538 UBE2ZQ9H832 354 aaPredicted RBP12.69□□□□□ -0.38
ACTN4-209ENST00000586538 RC3H2Q9HBD1 1191 aaKnown RBP12.69□□□□□ -0.38
ACTN4-209ENST00000586538 AAASQ9NRG9 546 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 PCDHB7Q9Y5E2 793 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 TTC3P53804 2025 aa12.69□□□□□ -0.38
ACTN4-209ENST00000586538 CYP3A7-CYP3A51PA0A087WV96 503 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 BMP1P13497 986 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 ZSCAN20P17040 1043 aaPredicted RBP12.68□□□□□ -0.38
ACTN4-209ENST00000586538 CYP3A7P24462 503 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 SARSP49591 514 aaKnown RBP12.68□□□□□ -0.38
ACTN4-209ENST00000586538 DNM2P50570 870 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 PRKCEQ02156 737 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 TFF2Q03403 129 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 TBC1D8BQ0IIM8 1120 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 CSPP1Q1MSJ5 1256 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 KRT40Q6A162 431 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 KIAA0319LQ8IZA0 1049 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 RSPH1Q8WYR4 309 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 SLC5A5Q92911 643 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 LENG9Q96B70 501 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 SCLT1Q96NL6 688 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 AGO3Q9H9G7 860 aaKnown RBP12.68□□□□□ -0.38
ACTN4-209ENST00000586538 AKT3Q9Y243 479 aa12.68□□□□□ -0.38
ACTN4-209ENST00000586538 SPTBN5Q9NRC6 3674 aaKnown RBP12.67□□□□□ -0.38
ACTN4-209ENST00000586538 CARNS1A5YM72 827 aa12.67□□□□□ -0.38
ACTN4-209ENST00000586538 CHMP2AO43633 222 aa12.67□□□□□ -0.38
ACTN4-209ENST00000586538 MARCH6O60337 910 aa12.67□□□□□ -0.38
ACTN4-209ENST00000586538 PFKFB2O60825 505 aa12.67□□□□□ -0.38
ACTN4-209ENST00000586538 MMP1P03956 469 aa12.67□□□□□ -0.38
ACTN4-209ENST00000586538 LEXMQ3ZCV2 418 aa12.67□□□□□ -0.38
ACTN4-209ENST00000586538 XKR3Q5GH77 459 aa12.67□□□□□ -0.38
ACTN4-209ENST00000586538 SLC24A5Q71RS6 500 aa12.67□□□□□ -0.38
ACTN4-209ENST00000586538 SPRED2Q7Z698 418 aa12.67□□□□□ -0.38
ACTN4-209ENST00000586538 NEK8Q86SG6 692 aa12.67□□□□□ -0.38
ACTN4-209ENST00000586538 PABPC5Q96DU9 382 aaKnown RBP12.67□□□□□ -0.38
ACTN4-209ENST00000586538 FAM20AQ96MK3 541 aa12.67□□□□□ -0.38
ACTN4-209ENST00000586538 C1QTNF1Q9BXJ1 281 aa12.67□□□□□ -0.38
ACTN4-209ENST00000586538 OSBPL7Q9BZF2 842 aa12.67□□□□□ -0.38
ACTN4-209ENST00000586538 ELAC1Q9H777 363 aaKnown RBP12.67□□□□□ -0.38
ACTN4-209ENST00000586538 DDX25Q9UHL0 483 aaKnown RBP12.67□□□□□ -0.38
ACTN4-209ENST00000586538 PPME1Q9Y570 386 aa12.67□□□□□ -0.38
ACTN4-209ENST00000586538 TTC28Q96AY4 2481 aa12.66□□□□□ -0.38
ACTN4-209ENST00000586538 TBX3O15119 743 aa12.66□□□□□ -0.38
ACTN4-209ENST00000586538 PPFIA3O75145 1194 aa12.66□□□□□ -0.38
ACTN4-209ENST00000586538 PSMD10O75832 226 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms