RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 CDC5LQ99459 802 aaKnown RBP7.85□□□□□ -1.15
TPM4-203ENST00000586193 LRFN3Q9BTN0 628 aa7.85□□□□□ -1.15
TPM4-203ENST00000586193 WDR12Q9GZL7 423 aaKnown RBP7.85□□□□□ -1.15
TPM4-203ENST00000586193 EPB41L1Q9H4G0 881 aa7.85□□□□□ -1.15
TPM4-203ENST00000586193 KCNH7Q9NS40 1196 aa7.85□□□□□ -1.15
TPM4-203ENST00000586193 USP36Q9P275 1121 aaKnown RBP7.85□□□□□ -1.15
TPM4-203ENST00000586193 GULP1Q9UBP9 304 aa7.85□□□□□ -1.15
TPM4-203ENST00000586193 DSEQ9UL01 958 aa7.85□□□□□ -1.15
TPM4-203ENST00000586193 LRCH1Q9Y2L9 728 aa7.85□□□□□ -1.15
TPM4-203ENST00000586193 ATP23Q9Y6H3 246 aa7.85□□□□□ -1.15
TPM4-203ENST00000586193 IGF2BP3O00425 579 aaKnown RBP eCLIP7.84□□□□□ -1.15
TPM4-203ENST00000586193 TERTO14746 1132 aaKnown RBP7.84□□□□□ -1.15
TPM4-203ENST00000586193 PPP1R11O60927 126 aaPredicted RBP7.84□□□□□ -1.15
TPM4-203ENST00000586193 DTNBO60941 627 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 HTR1BP28222 390 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 PIK3CBP42338 1070 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 SLC5A3P53794 718 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 MRPS9P82933 396 aaKnown RBP7.84□□□□□ -1.15
TPM4-203ENST00000586193 BTKQ06187 659 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 EPHA7Q15375 998 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 CNN3Q15417 329 aaKnown RBP7.84□□□□□ -1.15
TPM4-203ENST00000586193 PDCD2Q16342 344 aaPredicted RBP7.84□□□□□ -1.15
TPM4-203ENST00000586193 PITRM1Q5JRX3 1037 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 LDHAL6AQ6ZMR3 332 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 RNF111Q6ZNA4 994 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 TMEM52Q8NDY8 209 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 RIN2Q8WYP3 895 aaPredicted RBP7.84□□□□□ -1.15
TPM4-203ENST00000586193 UTP4Q969X6 686 aaKnown RBP7.84□□□□□ -1.15
TPM4-203ENST00000586193 PAGR1Q9BTK6 254 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 KCNF1Q9H3M0 494 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 ARFGAP3Q9NP61 516 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 SAGE1Q9NXZ1 904 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 SCINQ9Y6U3 715 aa7.84□□□□□ -1.15
TPM4-203ENST00000586193 LRRC10BA6NIK2 292 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 C22orf46C9J442 243 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 PRRT4C9JH25 899 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 MAFGO15525 162 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 DGKIO75912 1065 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 MTHFD2P13995 350 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 CEBPAP49715 358 aaPredicted RBP7.83□□□□□ -1.16
TPM4-203ENST00000586193 CACNB3P54284 484 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 LVRNQ6Q4G3 990 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 LINC00114Q6XXX2 140 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 KRBA2Q6ZNG9 492 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 ESPNLQ6ZVH7 1005 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 COL23A1Q86Y22 540 aaPredicted RBP7.83□□□□□ -1.16
TPM4-203ENST00000586193 NLGN4XQ8N0W4 816 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 KRT78Q8N1N4 520 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 Q8N1Y9 231 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 TMTC2Q8N394 836 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 OR2C3Q8N628 320 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 SPATA5Q8NB90 893 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 NEDD1Q8NHV4 660 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 AUTS2Q8WXX7 1259 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 MYRFLQ96LU7 910 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 CGRRF1Q99675 332 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 NUP62CLQ9H1M0 184 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 VPS11Q9H270 941 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 PDLIM7Q9NR12 457 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 ZSWIM5Q9P217 1185 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 CDC23Q9UJX2 597 aa7.83□□□□□ -1.16
TPM4-203ENST00000586193 COA3Q9Y2R0 106 aaPredicted RBP7.83□□□□□ -1.16
TPM4-203ENST00000586193 TMEM82A0PJX8 343 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 PRSS38A1L453 326 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 CAPN8A6NHC0 703 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 FUCA1P04066 466 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 FAM163BP0C2L3 166 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 IL6STP40189 918 aaPredicted RBP7.82□□□□□ -1.16
TPM4-203ENST00000586193 CCT5P48643 541 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 SLC16A1P53985 500 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 DUSP4Q13115 394 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 MUM1Q2TAK8 710 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 ANO6Q4KMQ2 910 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 PRRT3Q5FWE3 981 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 CATSPEREQ5SY80 951 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 MBNL2Q5VZF2 373 aaKnown RBP7.82□□□□□ -1.16
TPM4-203ENST00000586193 SWSAP1Q6NVH7 229 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 OGFOD3Q6PK18 319 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 SYDE1Q6ZW31 735 aaPredicted RBP7.82□□□□□ -1.16
TPM4-203ENST00000586193 FAM20CQ8IXL6 584 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 RBM12BQ8IXT5 1001 aaKnown RBP7.82□□□□□ -1.16
TPM4-203ENST00000586193 ARMC10Q8N2F6 343 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.82□□□□□ -1.16
TPM4-203ENST00000586193 WHAMMQ8TF30 809 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 LRTOMTQ8WZ04 291 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 RAX2Q96IS3 184 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 POFUT1Q9H488 388 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 PRDM12Q9H4Q4 367 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 SLC6A20Q9NP91 592 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 ERVK13-1Q9NX77 482 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 GPRC5BQ9NZH0 403 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 DPP7Q9UHL4 492 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 LIMCH1Q9UPQ0 1083 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 X6R8D5 127 aa7.82□□□□□ -1.16
TPM4-203ENST00000586193 hCG_1642624A0A1W2PR95 340 aa7.81□□□□□ -1.16
TPM4-203ENST00000586193 CFAP69A5D8W1 941 aa7.81□□□□□ -1.16
TPM4-203ENST00000586193 CCDC154A6NI56 674 aa7.81□□□□□ -1.16
TPM4-203ENST00000586193 ELL2O00472 640 aaPredicted RBP7.81□□□□□ -1.16
TPM4-203ENST00000586193 KPNA5O15131 536 aa7.81□□□□□ -1.16
TPM4-203ENST00000586193 MGEA5O60502 916 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms