RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 TRAPPC10P48553 1259 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 CDC42EP1Q00587 391 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 FBXO47Q5MNV8 452 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 PPP2R2DQ66LE6 453 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 EXOC8Q8IYI6 725 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 NEK9Q8TD19 979 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 TRAPPC12Q8WVT3 735 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 MAP7D2Q96T17 732 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 CDX2Q99626 313 aaPredicted RBP11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 JPH2Q9BR39 696 aaPredicted RBP11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 ZBED2Q9BTP6 218 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 NIFKQ9BYG3 293 aaKnown RBP11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 CELF4Q9BZC1 486 aaKnown RBP11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 VAV3Q9UKW4 847 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 COL4A6Q14031 1691 aa11.7□□□□□ -0.54
SMARCA4-209ENST00000586122 ZNF862O60290 1169 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 P4HBP07237 508 aaKnown RBP11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 GHRP10912 638 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 QARSP47897 775 aaKnown RBP11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 RABGGTBP53611 331 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 GNL2Q13823 731 aaKnown RBP11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 LPIN1Q14693 890 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 EPHA7Q15375 998 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 CALCRLQ16602 461 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 EARS2Q5JPH6 523 aaKnown RBP11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 POTEDQ86YR6 584 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 KIAA0319LQ8IZA0 1049 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 HAS1Q92839 578 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 TMX3Q96JJ7 454 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 FAM161BQ96MY7 647 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 GAS2L1Q99501 681 aaPredicted RBP11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 RAD9AQ99638 391 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 BACH2Q9BYV9 841 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 NKX2-4Q9H2Z4 354 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 RNF216Q9NWF9 866 aaPredicted RBP11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 NOL7Q9UMY1 257 aaKnown RBP11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 YBX2Q9Y2T7 364 aaKnown RBP11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 INSL6Q9Y581 213 aa11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.69□□□□□ -0.54
SMARCA4-209ENST00000586122 FAM205CA6NFA0 338 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 DTNBO60941 627 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 CA3P07451 260 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 FOSL2P15408 326 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 FOSBP53539 338 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 DEFB103AP81534 67 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 TBC1D8BQ0IIM8 1120 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 PAK2Q13177 524 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 TARBP2Q15633 366 aaKnown RBP11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 UGCGQ16739 394 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 NOSTRINQ8IVI9 506 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 C4orf19Q8IY42 314 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 MYOCDQ8IZQ8 938 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 METTL13Q8N6R0 699 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 GJA10Q969M2 543 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 SEPT9Q9UHD8 586 aaPredicted RBP11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 PCDHA12Q9UN75 941 aa11.68□□□□□ -0.54
SMARCA4-209ENST00000586122 EML1O00423 815 aa11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 GPR182O15218 404 aa11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 GAS2O43903 313 aaKnown RBP11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 U2AF2P26368 475 aaKnown RBP eCLIP11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 DNM2P50570 870 aa11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 CRYBB1P53674 252 aaPredicted RBP11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 HTRA4P83105 476 aaPredicted RBP11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 GUCY1B3Q02153 619 aa11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 SPIRE1Q08AE8 756 aa11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 GRIN2CQ14957 1233 aa11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 TCTN1Q2MV58 587 aa11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 EFCAB12Q6NXP0 572 aa11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 OTUD6AQ7L8S5 288 aa11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 LINC01465Q8N7H1 131 aa11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 TOP1MTQ969P6 601 aa11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 MTMR9Q96QG7 549 aa11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 ZSWIM4Q9H7M6 989 aa11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 TTC12Q9H892 705 aaPredicted RBP11.67□□□□□ -0.54
SMARCA4-209ENST00000586122 RALGAPA2Q2PPJ7 1873 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 ARID2Q68CP9 1835 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 RPS6KA5O75582 802 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 STBD1O95210 358 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 LYPLA2O95372 231 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 RFC5P40937 340 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 TAP1Q03518 808 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 TMEM62Q0P6H9 643 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 MTERF2Q49AM1 385 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 TTC38Q5R3I4 469 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 NCAPH2Q6IBW4 605 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 TRMT1LQ7Z2T5 733 aaKnown RBP11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 BANK1Q8NDB2 785 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 MYLIPQ8WY64 445 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 ZBTB10Q96DT7 871 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 SAMD11Q96NU1 681 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 LXNQ9BS40 222 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 AGO3Q9H9G7 860 aaKnown RBP11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 C1orf112Q9NSG2 853 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 PADI3Q9ULW8 664 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 SMC3Q9UQE7 1217 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 AKT3Q9Y243 479 aa11.66□□□□□ -0.54
SMARCA4-209ENST00000586122 IGKV6-21A0A0C4DH24 114 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms