RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 MYOCDQ8IZQ8 938 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 LRCH3Q96II8 777 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 DYDC2Q96IM9 177 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 NAP1L5Q96NT1 182 aaPredicted RBP11.52□□□□□ -0.57
LIG3-203ENST00000585370 INPP4AQ96PE3 977 aaPredicted RBP11.52□□□□□ -0.57
LIG3-203ENST00000585370 SPATC1LQ9H0A9 340 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 UNC45AQ9H3U1 944 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 ZSWIM4Q9H7M6 989 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 ADD3Q9UEY8 706 aaKnown RBP11.52□□□□□ -0.57
LIG3-203ENST00000585370 COL4A3BPQ9Y5P4 624 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 NFASCO94856 1347 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 SLC15A5A6NIM6 579 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 WDR64B1ANS9 1081 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 KCNJ18B7U540 433 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 EIF3JO75822 258 aaKnown RBP11.51□□□□□ -0.57
LIG3-203ENST00000585370 PRKCSHP14314 528 aaPredicted RBP11.51□□□□□ -0.57
LIG3-203ENST00000585370 SYN1P17600 705 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 GIT2Q14161 759 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 GRB14Q14449 540 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 KCNJ12Q14500 433 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 STXBP2Q15833 593 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 HERC4Q5GLZ8 1057 aaPredicted RBP11.51□□□□□ -0.57
LIG3-203ENST00000585370 TCP11X2Q5H9J9 407 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 WDR78Q5VTH9 848 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 ZNF746Q6NUN9 644 aaPredicted RBP11.51□□□□□ -0.57
LIG3-203ENST00000585370 FILIP1Q7Z7B0 1213 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 LRRC8AQ8IWT6 810 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 SMAP1Q8IYB5 467 aaPredicted RBP11.51□□□□□ -0.57
LIG3-203ENST00000585370 ANKRD35Q8N283 1001 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 CSGALNACT2Q8N6G5 542 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 KIAA0895Q8NCT3 520 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 SHCBP1Q8NEM2 672 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 IL31RAQ8NI17 732 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 TIPINQ9BVW5 301 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 SRRTQ9BXP5 876 aaKnown RBP11.51□□□□□ -0.57
LIG3-203ENST00000585370 SLC39A2Q9NP94 309 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 RTN4Q9NQC3 1192 aaKnown RBP11.51□□□□□ -0.57
LIG3-203ENST00000585370 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.51□□□□□ -0.57
LIG3-203ENST00000585370 RGL1Q9NZL6 768 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 SEL1LQ9UBV2 794 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 NRBP1Q9UHY1 535 aa11.51□□□□□ -0.57
LIG3-203ENST00000585370 DBR1Q9UK59 544 aaKnown RBP11.51□□□□□ -0.57
LIG3-203ENST00000585370 SPATA31C2B4DYI2 1134 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 N4BP3O15049 544 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 CHMP2AO43633 222 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 TBCAO75347 108 aaKnown RBP11.5□□□□□ -0.57
LIG3-203ENST00000585370 IGHA2P01877 340 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 HOXC6P09630 235 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 FCER1AP12319 257 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 SFPQP23246 707 aaKnown RBP eCLIP11.5□□□□□ -0.57
LIG3-203ENST00000585370 ICAM3P32942 547 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 MAGEA10P43363 369 aaPredicted RBP11.5□□□□□ -0.57
LIG3-203ENST00000585370 QARSP47897 775 aaKnown RBP11.5□□□□□ -0.57
LIG3-203ENST00000585370 PSMC6P62333 389 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 CTTNQ14247 550 aaKnown RBP11.5□□□□□ -0.57
LIG3-203ENST00000585370 ARSHQ5FYA8 562 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 SPECC1LQ69YQ0 1117 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 ANKRD40Q6AI12 368 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 RINT1Q6NUQ1 792 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 PPP4R3CPQ6ZMV5 832 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 STXBP4Q6ZWJ1 553 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 C4orf19Q8IY42 314 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 CCDC112Q8NEF3 446 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 NPLOC4Q8TAT6 608 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 UIMC1Q96RL1 719 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 DUSP9Q99956 384 aaKnown RBP11.5□□□□□ -0.57
LIG3-203ENST00000585370 BHMT2Q9H2M3 363 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 MROH8Q9H579 483 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 ODF2LQ9ULJ1 636 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 MAPK8IP1Q9UQF2 711 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.5□□□□□ -0.57
LIG3-203ENST00000585370 UNC80Q8N2C7 3258 aa11.5□□□□□ -0.57
LIG3-203ENST00000585370 ARHGEF35A5YM69 484 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 POTEB2H3BUK9 544 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 GNA14O95837 355 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 TPM1P09493 284 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 GUCY2CP25092 1073 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 KCNJ6P48051 423 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 COPB1P53618 953 aaKnown RBP11.49□□□□□ -0.57
LIG3-203ENST00000585370 PSMC5P62195 406 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 FKBP3Q00688 224 aaKnown RBP11.49□□□□□ -0.57
LIG3-203ENST00000585370 CYP4A11Q02928 519 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 ITGB3BPQ13352 177 aaPredicted RBP11.49□□□□□ -0.57
LIG3-203ENST00000585370 TRIM14Q14142 442 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 KRT31Q15323 416 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 LRRC26Q2I0M4 334 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 CCDC144BQ3MJ40 725 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 MFSD14CQ5VZR4 134 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 KCNV1Q6PIU1 500 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 C1orf186Q6ZWK4 172 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 APTXQ7Z2E3 356 aaKnown RBP11.49□□□□□ -0.57
LIG3-203ENST00000585370 NCAPG2Q86XI2 1143 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 TRPV1Q8NER1 839 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 KIAA1524Q8TCG1 905 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 CACTINQ8WUQ7 758 aaKnown RBP11.49□□□□□ -0.57
LIG3-203ENST00000585370 IQCDQ96DY2 449 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 CEP63Q96MT8 703 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 LXNQ9BS40 222 aa11.49□□□□□ -0.57
LIG3-203ENST00000585370 MOV10L1Q9BXT6 1211 aaKnown RBP11.49□□□□□ -0.57
LIG3-203ENST00000585370 OLFML3Q9NRN5 406 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 390.5 ms