RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 PCDHB7Q9Y5E2 793 aa20.78■□□□□ 0.92
TOP3A-220ENST00000585031 UBIAD1Q9Y5Z9 338 aa20.78■□□□□ 0.92
TOP3A-220ENST00000585031 EPG5Q9HCE0 2579 aa20.78■□□□□ 0.92
TOP3A-220ENST00000585031 KDM3AQ9Y4C1 1321 aa20.78■□□□□ 0.92
TOP3A-220ENST00000585031 MED19A0JLT2 244 aaPredicted RBP20.77■□□□□ 0.92
TOP3A-220ENST00000585031 C9IYK1 514 aa20.77■□□□□ 0.92
TOP3A-220ENST00000585031 ASGR2P07307 311 aa20.77■□□□□ 0.92
TOP3A-220ENST00000585031 FGFR1P11362 822 aa20.77■□□□□ 0.92
TOP3A-220ENST00000585031 NFX1Q12986 1120 aaKnown RBP20.77■□□□□ 0.92
TOP3A-220ENST00000585031 HDAC1Q13547 482 aaPredicted RBP20.77■□□□□ 0.92
TOP3A-220ENST00000585031 LRRC55Q6ZSA7 311 aa20.77■□□□□ 0.92
TOP3A-220ENST00000585031 ADAM2Q99965 735 aa20.77■□□□□ 0.92
TOP3A-220ENST00000585031 IFIT3O14879 490 aaKnown RBP20.76■□□□□ 0.91
TOP3A-220ENST00000585031 WEE2P0C1S8 567 aa20.76■□□□□ 0.91
TOP3A-220ENST00000585031 PBX3P40426 434 aa20.76■□□□□ 0.91
TOP3A-220ENST00000585031 KRT76Q01546 638 aa20.76■□□□□ 0.91
TOP3A-220ENST00000585031 KANK3Q6NY19 840 aa20.76■□□□□ 0.91
TOP3A-220ENST00000585031 RGS18Q9NS28 235 aa20.76■□□□□ 0.91
TOP3A-220ENST00000585031 DIAPH3Q9NSV4 1193 aa20.76■□□□□ 0.91
TOP3A-220ENST00000585031 RNF19AQ9NV58 838 aa20.76■□□□□ 0.91
TOP3A-220ENST00000585031 NCOR2Q9Y618 2525 aa20.76■□□□□ 0.91
TOP3A-220ENST00000585031 RPLP2P05387 115 aaKnown RBP20.75■□□□□ 0.91
TOP3A-220ENST00000585031 SRGAP2BP0DMP2 458 aa20.75■□□□□ 0.91
TOP3A-220ENST00000585031 MTHFD1LQ6UB35 978 aa20.75■□□□□ 0.91
TOP3A-220ENST00000585031 MRPS27Q92552 414 aaKnown RBP20.75■□□□□ 0.91
TOP3A-220ENST00000585031 RMDN1Q96DB5 314 aa20.75■□□□□ 0.91
TOP3A-220ENST00000585031 TCF25Q9BQ70 676 aa20.75■□□□□ 0.91
TOP3A-220ENST00000585031 SMIM35A0A1B0GVV1 85 aa20.74■□□□□ 0.91
TOP3A-220ENST00000585031 M0QZ92 97 aa20.74■□□□□ 0.91
TOP3A-220ENST00000585031 FAM189BP81408 668 aa20.74■□□□□ 0.91
TOP3A-220ENST00000585031 PLCB3Q01970 1234 aa20.74■□□□□ 0.91
TOP3A-220ENST00000585031 MTMR1Q13613 665 aa20.74■□□□□ 0.91
TOP3A-220ENST00000585031 UBE2SQ16763 222 aa20.74■□□□□ 0.91
TOP3A-220ENST00000585031 CYP2W1Q8TAV3 490 aa20.74■□□□□ 0.91
TOP3A-220ENST00000585031 OSBPL3Q9H4L5 887 aa20.74■□□□□ 0.91
TOP3A-220ENST00000585031 AAASQ9NRG9 546 aa20.74■□□□□ 0.91
TOP3A-220ENST00000585031 ST3GAL5Q9UNP4 418 aa20.74■□□□□ 0.91
TOP3A-220ENST00000585031 GINS2Q9Y248 185 aa20.74■□□□□ 0.91
TOP3A-220ENST00000585031 LZTS1Q9Y250 596 aa20.74■□□□□ 0.91
TOP3A-220ENST00000585031 TPRP12270 2363 aaKnown RBP20.74■□□□□ 0.91
TOP3A-220ENST00000585031 PI15O43692 258 aa20.73■□□□□ 0.91
TOP3A-220ENST00000585031 PDE4AP27815 886 aa20.73■□□□□ 0.91
TOP3A-220ENST00000585031 ANTXR2P58335 489 aa20.73■□□□□ 0.91
TOP3A-220ENST00000585031 B4GALNT3Q6L9W6 998 aa20.73■□□□□ 0.91
TOP3A-220ENST00000585031 SLC24A5Q71RS6 500 aa20.73■□□□□ 0.91
TOP3A-220ENST00000585031 KIAA0319LQ8IZA0 1049 aa20.73■□□□□ 0.91
TOP3A-220ENST00000585031 CUL5Q93034 780 aa20.73■□□□□ 0.91
TOP3A-220ENST00000585031 CDHR1Q96JP9 859 aa20.73■□□□□ 0.91
TOP3A-220ENST00000585031 MYL10Q9BUA6 226 aa20.73■□□□□ 0.91
TOP3A-220ENST00000585031 JADE2Q9NQC1 790 aa20.73■□□□□ 0.91
TOP3A-220ENST00000585031 ENTPD7Q9NQZ7 604 aa20.73■□□□□ 0.91
TOP3A-220ENST00000585031 RPS6KA5O75582 802 aa20.72■□□□□ 0.91
TOP3A-220ENST00000585031 CYP21A2P08686 494 aa20.72■□□□□ 0.91
TOP3A-220ENST00000585031 CWF19L1Q69YN2 538 aaKnown RBP20.72■□□□□ 0.91
TOP3A-220ENST00000585031 FAM43BQ6ZT52 329 aaPredicted RBP20.72■□□□□ 0.91
TOP3A-220ENST00000585031 NME8Q8N427 588 aa20.72■□□□□ 0.91
TOP3A-220ENST00000585031 C12orf76Q8N812 135 aaPredicted RBP20.72■□□□□ 0.91
TOP3A-220ENST00000585031 IGDCC4Q8TDY8 1250 aa20.72■□□□□ 0.91
TOP3A-220ENST00000585031 NECTIN4Q96NY8 510 aa20.72■□□□□ 0.91
TOP3A-220ENST00000585031 CASD1Q96PB1 797 aa20.72■□□□□ 0.91
TOP3A-220ENST00000585031 SPZ1Q9BXG8 430 aa20.72■□□□□ 0.91
TOP3A-220ENST00000585031 ADAM7Q9H2U9 754 aa20.72■□□□□ 0.91
TOP3A-220ENST00000585031 JPH1Q9HDC5 661 aaPredicted RBP20.72■□□□□ 0.91
TOP3A-220ENST00000585031 SLC9A2Q9UBY0 812 aa20.72■□□□□ 0.91
TOP3A-220ENST00000585031 LIMD1Q9UGP4 676 aa20.72■□□□□ 0.91
TOP3A-220ENST00000585031 HCFC2Q9Y5Z7 792 aa20.72■□□□□ 0.91
TOP3A-220ENST00000585031 DENND4AQ7Z401 1863 aa20.71■□□□□ 0.91
TOP3A-220ENST00000585031 DENND3A2RUS2 1198 aa20.71■□□□□ 0.91
TOP3A-220ENST00000585031 KLRC1P26715 233 aa20.71■□□□□ 0.91
TOP3A-220ENST00000585031 ACTR2P61160 394 aa20.71■□□□□ 0.91
TOP3A-220ENST00000585031 DSC3Q14574 896 aa20.71■□□□□ 0.91
TOP3A-220ENST00000585031 WTAPQ15007 396 aa20.71■□□□□ 0.91
TOP3A-220ENST00000585031 PLPPR4Q7Z2D5 763 aa20.71■□□□□ 0.91
TOP3A-220ENST00000585031 FAM228AQ86W67 206 aa20.71■□□□□ 0.91
TOP3A-220ENST00000585031 ZDHHC14Q8IZN3 488 aa20.71■□□□□ 0.91
TOP3A-220ENST00000585031 CMTR1Q8N1G2 835 aaKnown RBP20.71■□□□□ 0.91
TOP3A-220ENST00000585031 PPP1R16BQ96T49 567 aa20.71■□□□□ 0.91
TOP3A-220ENST00000585031 KRT37O76014 449 aa20.7■□□□□ 0.9
TOP3A-220ENST00000585031 PLEKHA8P1O95397 391 aa20.7■□□□□ 0.9
TOP3A-220ENST00000585031 NPR3P17342 541 aa20.7■□□□□ 0.9
TOP3A-220ENST00000585031 LAG3P18627 525 aa20.7■□□□□ 0.9
TOP3A-220ENST00000585031 STAT5BP51692 787 aa20.7■□□□□ 0.9
TOP3A-220ENST00000585031 PTH1RQ03431 593 aa20.7■□□□□ 0.9
TOP3A-220ENST00000585031 ITIH3Q06033 890 aa20.7■□□□□ 0.9
TOP3A-220ENST00000585031 ITGB3BPQ13352 177 aaPredicted RBP20.7■□□□□ 0.9
TOP3A-220ENST00000585031 KCNT2Q6UVM3 1135 aa20.7■□□□□ 0.9
TOP3A-220ENST00000585031 DGLUCYQ7Z3D6 616 aa20.7■□□□□ 0.9
TOP3A-220ENST00000585031 SRBD1Q8N5C6 995 aaKnown RBP20.7■□□□□ 0.9
TOP3A-220ENST00000585031 PSTPIP2Q9H939 334 aa20.7■□□□□ 0.9
TOP3A-220ENST00000585031 NGRNQ9NPE2 291 aaKnown RBP20.7■□□□□ 0.9
TOP3A-220ENST00000585031 KCNH7Q9NS40 1196 aa20.7■□□□□ 0.9
TOP3A-220ENST00000585031 C1orf112Q9NSG2 853 aa20.7■□□□□ 0.9
TOP3A-220ENST00000585031 TMEM161AQ9NX61 479 aa20.7■□□□□ 0.9
TOP3A-220ENST00000585031 hCG_1642624A0A1W2PR95 340 aa20.69■□□□□ 0.9
TOP3A-220ENST00000585031 C2orf71A6NGG8 1288 aa20.69■□□□□ 0.9
TOP3A-220ENST00000585031 ZBTB42B2RXF5 422 aa20.69■□□□□ 0.9
TOP3A-220ENST00000585031 CLASP2O75122 1294 aaKnown RBP20.69■□□□□ 0.9
TOP3A-220ENST00000585031 COL9A3Q14050 684 aaPredicted RBP20.69■□□□□ 0.9
TOP3A-220ENST00000585031 TPRNQ4KMQ1 711 aa20.69■□□□□ 0.9
TOP3A-220ENST00000585031 TMC7Q7Z402 723 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms