RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 TUBE1Q9UJT0 475 aa15.5■□□□□ 0.07
TRAF4-215ENST00000584944 EYSQ5T1H1 3165 aa15.5■□□□□ 0.07
TRAF4-215ENST00000584944 GOLGA6L4A6NEF3 574 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 M0QZ92 97 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 B4GALT4O60513 344 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 TMOD1P28289 359 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 YWHABP31946 246 aaKnown RBP15.49■□□□□ 0.07
TRAF4-215ENST00000584944 NASPP49321 788 aaPredicted RBP15.49■□□□□ 0.07
TRAF4-215ENST00000584944 DNM2P50570 870 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 CDK7P50613 346 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 UGCGQ16739 394 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 MTERF2Q49AM1 385 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 XKR9Q5GH70 373 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 GDF6Q6KF10 455 aaPredicted RBP15.49■□□□□ 0.07
TRAF4-215ENST00000584944 B3GNT9Q6UX72 402 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 IGSF22Q8N9C0 903 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 SLC43A3Q8NBI5 491 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 LMBR1Q8WVP7 490 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 SLC7A3Q8WY07 619 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 CEP170P1Q96L14 293 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 NACC1Q96RE7 527 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 JPH2Q9BR39 696 aaPredicted RBP15.49■□□□□ 0.07
TRAF4-215ENST00000584944 POLR3CQ9BUI4 534 aaPredicted RBP15.49■□□□□ 0.07
TRAF4-215ENST00000584944 NT5C3AQ9H0P0 336 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 TTYH1Q9H313 450 aaPredicted RBP15.49■□□□□ 0.07
TRAF4-215ENST00000584944 CCDC39Q9UFE4 941 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 COL1A2P08123 1366 aa15.49■□□□□ 0.07
TRAF4-215ENST00000584944 GRIN2DO15399 1336 aa15.48■□□□□ 0.07
TRAF4-215ENST00000584944 RPLP2P05387 115 aaKnown RBP15.48■□□□□ 0.07
TRAF4-215ENST00000584944 RPA1P27694 616 aa15.48■□□□□ 0.07
TRAF4-215ENST00000584944 POLGP54098 1239 aaPredicted RBP15.48■□□□□ 0.07
TRAF4-215ENST00000584944 FPGSQ05932 587 aa15.48■□□□□ 0.07
TRAF4-215ENST00000584944 CSPP1Q1MSJ5 1256 aa15.48■□□□□ 0.07
TRAF4-215ENST00000584944 TAF2Q6P1X5 1199 aa15.48■□□□□ 0.07
TRAF4-215ENST00000584944 CABP7Q86V35 215 aa15.48■□□□□ 0.07
TRAF4-215ENST00000584944 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.48■□□□□ 0.071e-7■■■■■ 51
TRAF4-215ENST00000584944 FAM126BQ8IXS8 530 aa15.48■□□□□ 0.07
TRAF4-215ENST00000584944 C4orf19Q8IY42 314 aa15.48■□□□□ 0.07
TRAF4-215ENST00000584944 LINC00301Q8NCQ3 95 aa15.48■□□□□ 0.07
TRAF4-215ENST00000584944 RNPC3Q96LT9 517 aaKnown RBP15.48■□□□□ 0.07
TRAF4-215ENST00000584944 SCLT1Q96NL6 688 aa15.48■□□□□ 0.07
TRAF4-215ENST00000584944 MAP7D2Q96T17 732 aa15.48■□□□□ 0.07
TRAF4-215ENST00000584944 HIPK3Q9H422 1215 aa15.48■□□□□ 0.07
TRAF4-215ENST00000584944 TBX21Q9UL17 535 aa15.48■□□□□ 0.07
TRAF4-215ENST00000584944 DNM3Q9UQ16 869 aa15.48■□□□□ 0.07
TRAF4-215ENST00000584944 SRPRBQ9Y5M8 271 aaKnown RBP15.48■□□□□ 0.07
TRAF4-215ENST00000584944 ARHGEF35A5YM69 484 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 MAGEB2O15479 319 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 PPP6R2O75170 966 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 SLITRK3O94933 977 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 TIMP1P01033 207 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 CYP2C9P11712 490 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 MUTP22033 750 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 THPOP40225 353 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 PTK7Q13308 1070 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 PTPAQ15257 358 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 POTEGQ6S5H5 508 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 CATSPER3Q86XQ3 398 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 PRUNE2Q8WUY3 3088 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 HSD17B14Q9BPX1 270 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 FAM49AQ9H0Q0 323 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-215ENST00000584944 CSRNP2Q9H175 543 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 SUGCTQ9HAC7 445 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 DDX19AQ9NUU7 478 aaKnown RBP15.47■□□□□ 0.07
TRAF4-215ENST00000584944 KIAA1024Q9UPX6 916 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 ZDHHC9Q9Y397 364 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 PPME1Q9Y570 386 aa15.47■□□□□ 0.07
TRAF4-215ENST00000584944 TMEM265A0A087WTH1 108 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 PP2D1A8MPX8 630 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 TREHO43280 583 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 SLC26A4O43511 780 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 ZNF862O60290 1169 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 CUTAO60888 179 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 SSBP05455 408 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRAF4-215ENST00000584944 KLRC1P26715 233 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 CDC25AP30304 524 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 RFC5P40937 340 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 ZNF200P98182 395 aaPredicted RBP15.46■□□□□ 0.07
TRAF4-215ENST00000584944 TPRNQ4KMQ1 711 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 PLA2G4FQ68DD2 849 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 CAGE1Q8TC20 777 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 PIGOQ8TEQ8 1089 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 TRAPPC12Q8WVT3 735 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 COL25A1Q9BXS0 654 aaPredicted RBP15.46■□□□□ 0.07
TRAF4-215ENST00000584944 NIFKQ9BYG3 293 aaKnown RBP15.46■□□□□ 0.07
TRAF4-215ENST00000584944 PPP1R12CQ9BZL4 782 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 CYP26B1Q9NR63 512 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 ANKEF1Q9NU02 776 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 FAM13BQ9NYF5 915 aa15.46■□□□□ 0.07
TRAF4-215ENST00000584944 FBXO2Q9UK22 296 aaPredicted RBP15.46■□□□□ 0.07
TRAF4-215ENST00000584944 VCANP13611 3396 aa15.45■□□□□ 0.06
TRAF4-215ENST00000584944 MED24O75448 989 aa15.45■□□□□ 0.06
TRAF4-215ENST00000584944 LYPLA2O95372 231 aa15.45■□□□□ 0.06
TRAF4-215ENST00000584944 XRCC6P12956 609 aaKnown RBP eCLIP15.45■□□□□ 0.06
TRAF4-215ENST00000584944 IL17AQ16552 155 aa15.45■□□□□ 0.06
TRAF4-215ENST00000584944 IER5Q5VY09 327 aa15.45■□□□□ 0.06
TRAF4-215ENST00000584944 MFSD5Q6N075 450 aa15.45■□□□□ 0.06
TRAF4-215ENST00000584944 MTHFD1LQ6UB35 978 aa15.45■□□□□ 0.06
TRAF4-215ENST00000584944 SERINC5Q86VE9 423 aa15.45■□□□□ 0.06
TRAF4-215ENST00000584944 TMEM199Q8N511 208 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms