RNA–Protein interactions for RNA: ENST00000584931.1

BPTF-218, Transcript of bromodomain PHD finger transcription factor, human

TSL 3

Gene BPTF, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BPTF-218	ENST00000584931	SLIT1	O75093	1534 aa		4.55	□□□□□ -1.68
BPTF-218	ENST00000584931	XIRP1	Q702N8	1843 aa	Known RBP	4.55	□□□□□ -1.68
BPTF-218	ENST00000584931	NKTR	P30414	1462 aa	Known RBP	4.55	□□□□□ -1.68
BPTF-218	ENST00000584931	ERVK-7	P63135	1459 aa		4.55	□□□□□ -1.68
BPTF-218	ENST00000584931	TMEM2	Q9UHN6	1383 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	ZNF644	Q9H582	1327 aa	Predicted RBP	4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	CCDC189	A1A4V9	331 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	TBC1D8	O95759	1140 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	ASGR2	P07307	311 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	GSTM1	P09488	218 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	SLC9A1	P19634	815 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	YY1	P25490	414 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	KPNA1	P52294	538 aa	Predicted RBP	4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	OS9	Q13438	667 aa	Predicted RBP	4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	LRRC32	Q14392	662 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	ZNF267	Q14586	743 aa	Predicted RBP	4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	SNX17	Q15036	470 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	DDB1	Q16531	1140 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	GAB4	Q2WGN9	574 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	RTP2	Q5QGT7	225 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	CXorf57	Q6NSI4	855 aa	Known RBP	4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	PNMA8A	Q86V59	439 aa	Predicted RBP	4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	SPICE1	Q8N0Z3	855 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	PARD3B	Q8TEW8	1205 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	TGFBRAP1	Q8WUH2	860 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	DIO2	Q92813	273 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	PPP1R16B	Q96T49	567 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	CDIP1	Q9H305	208 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	EPB41L4B	Q9H329	900 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	CABP5	Q9NP86	173 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	GPR27	Q9NS67	375 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	TNFRSF10D	Q9UBN6	386 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	SPEF1	Q9Y4P9	236 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	ABCC3	O15438	1527 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	CCDC18	Q5T9S5	1454 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	ARHGAP35	Q9NRY4	1499 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	MBD5	Q9P267	1494 aa		4.54	□□□□□ -1.68
BPTF-218	ENST00000584931	CCNB3	Q8WWL7	1395 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	TIAM1	Q13009	1591 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	GOLGA6C	A6NDK9	693 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	GOLGA6B	A6NDN3	693 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	WTIP	A6NIX2	430 aa	Predicted RBP	4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	NFIB	O00712	420 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	XPOT	O43592	962 aa	Known RBP	4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	PAPLN	O95428	1278 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	LTF	P02788	710 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	HPX	P02790	462 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	MYL3	P08590	195 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	GOLGA6D	P0CG33	693 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	RBP3	P10745	1247 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	TRIM27	P14373	513 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	VAV1	P15498	845 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	KRT15	P19012	456 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	BMP8B	P34820	402 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	KIR2DL1	P43626	348 aa	Predicted RBP	4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	KIR2DL2	P43627	348 aa	Predicted RBP	4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	JAM2	P57087	298 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	TMEM62	Q0P6H9	643 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	PDCD1	Q15116	288 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	ARHGAP29	Q52LW3	1261 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	COBLL1	Q53SF7	1204 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	HLA-DQA1	Q5Y7H0	255 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	GALNT18	Q6P9A2	607 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	CYP2R1	Q6VVX0	501 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	BRINP3	Q76B58	766 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	FCRL2	Q96LA5	508 aa	Predicted RBP	4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	DIRC2	Q96SL1	478 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	ALG1	Q9BT22	464 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	SARG	Q9BW04	601 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	JAM3	Q9BX67	310 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	SLC13A1	Q9BZW2	595 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	PPCS	Q9HAB8	311 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	SMURF1	Q9HCE7	757 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	TCF7L1	Q9HCS4	588 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	GOLGA6A	Q9NYA3	693 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	USP25	Q9UHP3	1055 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	SAP30BP	Q9UHR5	308 aa	Known RBP	4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	ANKRD6	Q9Y2G4	727 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	ZNF281	Q9Y2X9	895 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	ADGB	Q8N7X0	1667 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	EEA1	Q15075	1411 aa		4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	AHDC1	Q5TGY3	1603 aa	Predicted RBP	4.53	□□□□□ -1.68
BPTF-218	ENST00000584931	CEP350	Q5VT06	3117 aa		4.52	□□□□□ -1.69
BPTF-218	ENST00000584931	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.52	□□□□□ -1.69
BPTF-218	ENST00000584931	SHPRH	Q149N8	1683 aa		4.52	□□□□□ -1.69
BPTF-218	ENST00000584931	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.52	□□□□□ -1.69
BPTF-218	ENST00000584931	TCRBV5S4A2T	A0A5A2	114 aa		4.52	□□□□□ -1.69
BPTF-218	ENST00000584931	IFRD1	O00458	451 aa	Predicted RBP	4.52	□□□□□ -1.69
BPTF-218	ENST00000584931	IL33	O95760	270 aa		4.52	□□□□□ -1.69
BPTF-218	ENST00000584931	AMY2A	P04746	511 aa		4.52	□□□□□ -1.69
BPTF-218	ENST00000584931	ZGLP1	P0C6A0	271 aa		4.52	□□□□□ -1.69
BPTF-218	ENST00000584931	TMEM253	P0C7T8	217 aa		4.52	□□□□□ -1.69
BPTF-218	ENST00000584931	ZBTB48	P10074	688 aa	Predicted RBP	4.52	□□□□□ -1.69
BPTF-218	ENST00000584931	PDE6A	P16499	860 aa		4.52	□□□□□ -1.69
BPTF-218	ENST00000584931	AMY2B	P19961	511 aa		4.52	□□□□□ -1.69
BPTF-218	ENST00000584931	RECQL	P46063	649 aa	Predicted RBP	4.52	□□□□□ -1.69
BPTF-218	ENST00000584931	GPR3	P46089	330 aa		4.52	□□□□□ -1.69

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