RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 FBXO21O94952 628 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 IDI1Q13907 227 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 RAB33AQ14088 237 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 SART3Q15020 963 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 HABP4Q5JVS0 413 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 ODR4Q5SWX8 454 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 CNNM4Q6P4Q7 775 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 FBXL19Q6PCT2 694 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 BNC2Q6ZN30 1099 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 CCDC146Q8IYE0 955 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 E2F7Q96AV8 911 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 FAM89AQ96GI7 184 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 RCC1LQ96I51 464 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 SLC6A18Q96N87 628 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 PNNQ9H307 717 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 PCDH12Q9NPG4 1184 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 SCN4AP35499 1836 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 KDM2BQ8NHM5 1336 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 LAMB1P07942 1786 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 PRR33A8MZF0 331 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 PEX14O75381 377 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 USP2O75604 605 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 ASMTLO95671 621 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 MYCLP1P12525 358 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 CCND1P24385 295 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 HOXC12P31275 282 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 NTF4P34130 210 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 FOXO4P98177 505 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 SMAD5Q99717 465 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 TMEM168Q9H0V1 697 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 L2HGDHQ9H9P8 463 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 TIMM13Q9Y5L4 95 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 CGNL1Q0VF96 1302 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 ZNF644Q9H582 1327 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 ADGRB1O14514 1584 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 H7BY64 318 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 PRAMEF1O95521 474 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 KRT85P78386 507 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 CACNB2Q08289 660 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 SPIRE1Q08AE8 756 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 HDAC1Q13547 482 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 CERS3Q8IU89 383 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 SIRT2Q8IXJ6 389 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 FAM169BQ8N8A8 192 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 KCNH5Q8NCM2 988 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 ZSWIM2Q8NEG5 633 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 HHIPL1Q96JK4 782 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 ZC3H10Q96K80 434 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 SCYL1Q96KG9 808 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 RNPC3Q96LT9 517 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 GP6Q9HCN6 339 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 CHPF2Q9P2E5 772 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 AKT3Q9Y243 479 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 ESYT3A0FGR9 886 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 KRT18P05783 430 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 GYS2P54840 703 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 SV2CQ496J9 727 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 PRAMEF18Q5VWM3 479 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 CPZQ66K79 652 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 NFXL1Q6ZNB6 911 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 PAF1Q8N7H5 531 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 TRIM63Q969Q1 353 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 DACT3Q96B18 629 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 MMP19Q99542 508 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 FEZ1Q99689 392 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 ORAI3Q9BRQ5 295 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 CNTD2Q9H8S5 307 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 TNFRSF12AQ9NP84 129 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 IMPACTQ9P2X3 320 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 MBD1Q9UIS9 605 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 FBXO10Q9UK96 956 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 ZNRF3Q9ULT6 936 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 TLR6Q9Y2C9 796 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 CCDC163A0A0D9SF12 145 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 PRC1O43663 620 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 FXR1P51114 621 aaKnown RBP eCLIP2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 NFKB2Q00653 900 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 KIAA0907Q7Z7F0 614 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 TRMT2BQ96GJ1 504 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 TERF2IPQ9NYB0 399 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 CPDO75976 1380 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 RGPD5Q99666 1765 aa2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 TNRC18O15417 2968 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-211ENST00000584897 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 NPHP1O15259 732 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 CUTAO60888 179 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 DGKIO75912 1065 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 VIL1P09327 827 aaKnown RBP2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 MSL3P1P0C860 447 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 SLC6A11P48066 632 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 LIPIQ6XZB0 460 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 ETV3LQ6ZN32 361 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 FMNL3Q8IVF7 1028 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 DHX37Q8IY37 1157 aaKnown RBP2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 KYQ8NBH2 561 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 RIN3Q8TB24 985 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 CHAMP1Q96JM3 812 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 ZDHHC15Q96MV8 337 aa2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms