RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 UBLCP1Q8WVY7 318 aaPredicted RBP13.88□□□□□ -0.19
ITGB4-212ENST00000584558 MTRQ99707 1265 aa13.88□□□□□ -0.19
ITGB4-212ENST00000584558 TUBGCP2Q9BSJ2 902 aa13.88□□□□□ -0.19
ITGB4-212ENST00000584558 NUCKS1Q9H1E3 243 aaKnown RBP13.88□□□□□ -0.19
ITGB4-212ENST00000584558 DHX36Q9H2U1 1008 aaKnown RBP13.88□□□□□ -0.19
ITGB4-212ENST00000584558 PLCB1Q9NQ66 1216 aa13.88□□□□□ -0.19
ITGB4-212ENST00000584558 SALL4Q9UJQ4 1053 aa13.88□□□□□ -0.19
ITGB4-212ENST00000584558 CORO1CQ9ULV4 474 aaPredicted RBP13.88□□□□□ -0.19
ITGB4-212ENST00000584558 RASSF10A6NK89 507 aa13.88□□□□□ -0.19
ITGB4-212ENST00000584558 TTLL1O95922 423 aa13.88□□□□□ -0.19
ITGB4-212ENST00000584558 EEF1GP26641 437 aaKnown RBP13.88□□□□□ -0.19
ITGB4-212ENST00000584558 HSPA9P38646 679 aaKnown RBP13.88□□□□□ -0.19
ITGB4-212ENST00000584558 MAGOHP61326 146 aaKnown RBP13.88□□□□□ -0.19
ITGB4-212ENST00000584558 ZNF844Q08AG5 666 aa13.88□□□□□ -0.19
ITGB4-212ENST00000584558 GNPTABQ3T906 1256 aa13.88□□□□□ -0.19
ITGB4-212ENST00000584558 LRRC47Q8N1G4 583 aaKnown RBP13.88□□□□□ -0.19
ITGB4-212ENST00000584558 MDM1Q8TC05 714 aa13.88□□□□□ -0.19
ITGB4-212ENST00000584558 CCHCR1Q8TD31 782 aa13.88□□□□□ -0.19
ITGB4-212ENST00000584558 RASGRP4Q8TDF6 673 aa13.88□□□□□ -0.19
ITGB4-212ENST00000584558 MAGOHBQ96A72 148 aaKnown RBP13.88□□□□□ -0.19
ITGB4-212ENST00000584558 PSMD1Q99460 953 aa13.88□□□□□ -0.19
ITGB4-212ENST00000584558 BCS1LQ9Y276 419 aa13.88□□□□□ -0.19
ITGB4-212ENST00000584558 GTPBP6O43824 516 aaPredicted RBP13.87□□□□□ -0.19
ITGB4-212ENST00000584558 DRD4P21917 467 aa13.87□□□□□ -0.19
ITGB4-212ENST00000584558 ASPRV1Q53RT3 343 aa13.87□□□□□ -0.19
ITGB4-212ENST00000584558 SLC30A9Q6PML9 568 aa13.87□□□□□ -0.19
ITGB4-212ENST00000584558 TTLL6Q8N841 843 aa13.87□□□□□ -0.19
ITGB4-212ENST00000584558 ANKS4BQ8N8V4 417 aa13.87□□□□□ -0.19
ITGB4-212ENST00000584558 L3MBTL3Q96JM7 780 aaPredicted RBP13.87□□□□□ -0.19
ITGB4-212ENST00000584558 ATRNL1Q5VV63 1379 aa13.87□□□□□ -0.19
ITGB4-212ENST00000584558 RAD51CO43502 376 aa13.87□□□□□ -0.19
ITGB4-212ENST00000584558 NEFHP12036 1026 aa13.87□□□□□ -0.19
ITGB4-212ENST00000584558 EIF4A3P38919 411 aaKnown RBP13.87□□□□□ -0.19
ITGB4-212ENST00000584558 RUFY4Q6ZNE9 571 aa13.87□□□□□ -0.19
ITGB4-212ENST00000584558 PRCCQ92733 491 aaPredicted RBP13.87□□□□□ -0.19
ITGB4-212ENST00000584558 CCDC17Q96LX7 622 aa13.87□□□□□ -0.19
ITGB4-212ENST00000584558 PIGSQ96S52 555 aa13.87□□□□□ -0.19
ITGB4-212ENST00000584558 NDST4Q9H3R1 872 aa13.87□□□□□ -0.19
ITGB4-212ENST00000584558 RMND1Q9NWS8 449 aa13.87□□□□□ -0.19
ITGB4-212ENST00000584558 ARHGAP20Q9P2F6 1191 aa13.87□□□□□ -0.19
ITGB4-212ENST00000584558 LINGO3P0C6S8 592 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 MAGEA1P43355 309 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 SLMAPQ14BN4 828 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 CHADLQ6NUI6 762 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 TATDN1Q6P1N9 297 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 MTMR8Q96EF0 704 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 CHMP6Q96FZ7 201 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 ARFGEF1Q9Y6D6 1849 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 FRMPD2Q68DX3 1309 aaPredicted RBP13.86□□□□□ -0.19
ITGB4-212ENST00000584558 CTNND1O60716 968 aaKnown RBP13.86□□□□□ -0.19
ITGB4-212ENST00000584558 EIF6P56537 245 aaKnown RBP13.86□□□□□ -0.19
ITGB4-212ENST00000584558 RASSF7Q02833 373 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 ZNF543Q08ER8 600 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 BIRC3Q13489 604 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 UAP1Q16222 522 aaPredicted RBP13.86□□□□□ -0.19
ITGB4-212ENST00000584558 KLHDC7AQ5VTJ3 777 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 LRIG3Q6UXM1 1119 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 MAEAQ7L5Y9 396 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 DDX42Q86XP3 938 aaKnown RBP eCLIP13.86□□□□□ -0.19
ITGB4-212ENST00000584558 RTKN2Q8IZC4 609 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 GMLQ99445 158 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 UBA5Q9GZZ9 404 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 SLC5A4Q9NY91 659 aa13.86□□□□□ -0.19
ITGB4-212ENST00000584558 ESYT2A0FGR8 921 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 FTCDO95954 541 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 MCM7P33993 719 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 PRPHP41219 470 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 MTIF2P46199 727 aaKnown RBP13.85□□□□□ -0.19
ITGB4-212ENST00000584558 TCP10Q12799 353 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 RIPK1Q13546 671 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 ARL6IP4Q66PJ3 421 aaKnown RBP13.85□□□□□ -0.19
ITGB4-212ENST00000584558 PDXDC2PQ6P474 469 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 SPICE1Q8N0Z3 855 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 PROCA1Q8NCQ7 364 aaPredicted RBP13.85□□□□□ -0.19
ITGB4-212ENST00000584558 BORCS6Q96GS4 357 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 PI4KBQ9UBF8 816 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 PACSIN2Q9UNF0 486 aaPredicted RBP13.85□□□□□ -0.19
ITGB4-212ENST00000584558 KCNJ2P63252 427 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 SHROOM1Q2M3G4 852 aaPredicted RBP13.85□□□□□ -0.19
ITGB4-212ENST00000584558 KRT71Q3SY84 523 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 ZC3H12AQ5D1E8 599 aaKnown RBP13.85□□□□□ -0.19
ITGB4-212ENST00000584558 ADSSL1Q8N142 457 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 CSGALNACT2Q8N6G5 542 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 PRMT6Q96LA8 375 aaPredicted RBP13.85□□□□□ -0.19
ITGB4-212ENST00000584558 NOX5Q96PH1 765 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 OSBPL1AQ9BXW6 950 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 GGT7Q9UJ14 662 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 SLC12A4Q9UP95 1085 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 BRCA1P38398 1863 aaKnown RBP13.85□□□□□ -0.19
ITGB4-212ENST00000584558 H0YGN5 161 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 hCG_1984214I3L0E3 225 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 ENTPD3O75355 529 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 BLMHQ13867 455 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 TRIM68Q6AZZ1 485 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 ZNF713Q8N859 430 aaPredicted RBP13.85□□□□□ -0.19
ITGB4-212ENST00000584558 RETREG2Q8NC44 543 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 MKL1Q969V6 931 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 TSC22D3Q99576 134 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 SYT17Q9BSW7 474 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 THAP9Q9H5L6 903 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms