RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 PDE6CP51160 858 aa12.9□□□□□ -0.34
CDK5RAP3-232ENST00000584168 CACNB3P54284 484 aa12.9□□□□□ -0.34
CDK5RAP3-232ENST00000584168 NLRP12P59046 1061 aa12.9□□□□□ -0.34
CDK5RAP3-232ENST00000584168 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
CDK5RAP3-232ENST00000584168 RUFY4Q6ZNE9 571 aa12.9□□□□□ -0.34
CDK5RAP3-232ENST00000584168 TSEN2Q8NCE0 465 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-232ENST00000584168 PTPRN2Q92932 1015 aa12.9□□□□□ -0.34
CDK5RAP3-232ENST00000584168 RPGRIP1Q96KN7 1286 aa12.9□□□□□ -0.34
CDK5RAP3-232ENST00000584168 PANX2Q96RD6 677 aa12.9□□□□□ -0.34
CDK5RAP3-232ENST00000584168 NRDE2Q9H7Z3 1164 aa12.9□□□□□ -0.34
CDK5RAP3-232ENST00000584168 SCOCQ9UIL1 159 aa12.9□□□□□ -0.34
CDK5RAP3-232ENST00000584168 GOLGA6L10A0A0M3HER8 536 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 GOLGA8BA8MQT2 603 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CPLX1O14810 134 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 BAG3O95817 575 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 KRT14P02533 472 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 USP17L8P0C7I0 530 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 HOXD10P28358 340 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 PTGER2P43116 358 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ALDH5A1P51649 535 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 PMS2P54278 862 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 TGFB2P61812 414 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 MAP7Q14244 749 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 GRAMD4Q6IC98 578 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 TTLL6Q8N841 843 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ZIM3Q96PE6 472 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 PFDN4Q9NQP4 134 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CHD4Q14839 1912 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SOWAHDA6NJG2 315 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 KIF28PB7ZC32 967 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 TRAPPC3O43617 180 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 RAD17O75943 681 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 PFKFB1P16118 471 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CYB5R4Q7L1T6 521 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 MAPKAPK5Q8IW41 473 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 FBXL16Q8N461 479 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 TGFBRAP1Q8WUH2 860 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 C7orf43Q8WVR3 580 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 MMS19Q96T76 1030 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 EIF2AQ9BY44 585 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 PNMA2Q9UL42 364 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 BCS1LQ9Y276 419 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 MYPNQ86TC9 1320 aa12.89□□□□□ -0.35
CDK5RAP3-232ENST00000584168 A0A0J9YVX5 310 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 USP17L12C9JPN9 530 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 USP17L21D6R901 530 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ENDOUP21128 410 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 MARCKSP29966 332 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SERPINB4P48594 390 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CCT8P50990 548 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 LSAMPQ13449 338 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ANO1Q5XXA6 986 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 MYL10Q9BUA6 226 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 NACAP1Q9BZK3 213 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SPON1Q9HCB6 807 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SEL1LQ9UBV2 794 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 HPS5Q9UPZ3 1129 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 TMEM110-MUSTN1A8MSY1 372 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SART1O43290 800 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 IL1R1P14778 569 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SH3BGRP55822 239 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 PICALMQ13492 652 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 DAAM2Q86T65 1068 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SCUBE1Q8IWY4 988 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 HPS3Q969F9 1004 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 DHTKD1Q96HY7 919 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 GBP5Q96PP8 586 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SMC6Q96SB8 1091 aa12.88□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CETN3O15182 167 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 KDM1AO60341 852 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ECE2O60344 883 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 GEMIN4P57678 1058 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ANTXR2P58335 489 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 RAD9BQ6WBX8 426 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ARFGAP2Q8N6H7 521 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 NOC3LQ8WTT2 800 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 DYNLL2Q96FJ2 89 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 NAP1L3Q99457 506 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 SIKE1Q9BRV8 207 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CCDC68Q9H2F9 335 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ADAM22Q9P0K1 906 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 TTF2Q9UNY4 1162 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CARD8Q9Y2G2 431 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CD2APQ9Y5K6 639 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 KIAA1551Q9HCM1 1747 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ITIH6Q6UXX5 1313 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 BOLA2-SMG1P6H3BVE0 249 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CMA1P23946 247 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 MATR3P43243 847 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 BTDP43251 543 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ITGB3BPQ13352 177 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 CNPY1Q3B7I2 92 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 RASIP1Q5U651 963 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 IRGCQ6NXR0 463 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 TRAPPC11Q7Z392 1133 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ATP8A2Q9NTI2 1148 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 ARHGEF38Q9NXL2 777 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 HSFX1Q9UBD0 423 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 MROH7-TTC4A0A0A0MT08 1334 aa12.87□□□□□ -0.35
CDK5RAP3-232ENST00000584168 HIP1RO75146 1068 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms