RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 CEP57L1Q8IYX8 460 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 SYT2Q8N9I0 419 aaPredicted RBP13□□□□□ -0.33
CDRT1-207ENST00000583965 PIGOQ8TEQ8 1089 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 DHX58Q96C10 678 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 TIGD1Q96MW7 591 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 PLIN2Q99541 437 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 LRRC27Q9C0I9 530 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 CYP26B1Q9NR63 512 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 BLOC1S4Q9NUP1 217 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 KCND2Q9NZV8 630 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 SEPT9Q9UHD8 586 aaPredicted RBP13□□□□□ -0.33
CDRT1-207ENST00000583965 TRPC6Q9Y210 931 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 NRCAMQ92823 1304 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 A0A1W2PQ45 241 aaPredicted RBP12.99□□□□□ -0.33
CDRT1-207ENST00000583965 A0A1W2PQY0 241 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 ARHGEF35A5YM69 484 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 RRN3P2A6NIE6 340 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 E9PMD0 336 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 TRAK2O60296 914 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 NR1I2O75469 434 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 PLA2G4BP0C869 781 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 GNAT1P11488 350 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 LIG1P18858 919 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 AMPD3Q01432 767 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 PTPN11Q06124 597 aaPredicted RBP12.99□□□□□ -0.33
CDRT1-207ENST00000583965 TARBP2Q15633 366 aaKnown RBP12.99□□□□□ -0.33
CDRT1-207ENST00000583965 KLHL40Q2TBA0 621 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 XKR9Q5GH70 373 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 SV2BQ7L1I2 683 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 SESTD1Q86VW0 696 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 CEP170P1Q96L14 293 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 BHMT2Q9H2M3 363 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 TNMDQ9H2S6 317 aa12.99□□□□□ -0.33
CDRT1-207ENST00000583965 A0A0U1RQG5 324 aaPredicted RBP12.98□□□□□ -0.33
CDRT1-207ENST00000583965 ZBTB39O15060 712 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 ACTN4O43707 911 aaKnown RBP12.98□□□□□ -0.33
CDRT1-207ENST00000583965 GAS2O43903 313 aaKnown RBP12.98□□□□□ -0.33
CDRT1-207ENST00000583965 KINO60870 393 aaKnown RBP12.98□□□□□ -0.33
CDRT1-207ENST00000583965 SMIM10L2AP0DMW4 78 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 SMIM10L2BP0DMW5 78 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 INSRRP14616 1297 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 HOXC8P31273 242 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 RFC5P40937 340 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 SLC12A3P55017 1021 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 PPFIA1Q13136 1202 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 ITGA7Q13683 1181 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 MCM6Q14566 821 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 NBPF20Q3BBV1 942 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 LONRF3Q496Y0 759 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 MTERF2Q49AM1 385 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 PLA2G4FQ68DD2 849 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 KRBA2Q6ZNG9 492 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 TRMT1LQ7Z2T5 733 aaKnown RBP12.98□□□□□ -0.33
CDRT1-207ENST00000583965 ELOA2Q8IYF1 753 aaPredicted RBP12.98□□□□□ -0.33
CDRT1-207ENST00000583965 C7orf31Q8N865 590 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 CNNM3Q8NE01 707 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 LRRC15Q8TF66 581 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 VTI1AQ96AJ9 217 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 CEP89Q96ST8 783 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 JPH2Q9BR39 696 aaPredicted RBP12.98□□□□□ -0.33
CDRT1-207ENST00000583965 TIPINQ9BVW5 301 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 STARD7Q9NQZ5 370 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 KBTBD4Q9NVX7 518 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 DACT1Q9NYF0 836 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 SERTAD1Q9UHV2 236 aa12.98□□□□□ -0.33
CDRT1-207ENST00000583965 HOOK1Q9UJC3 728 aaKnown RBP12.98□□□□□ -0.33
CDRT1-207ENST00000583965 TMEM150BA6NC51 233 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 ZBTB42B2RXF5 422 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 MAGEB2O15479 319 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 DGAT1O75907 488 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 MYL1P05976 194 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 MNX1P50219 401 aaPredicted RBP12.97□□□□□ -0.33
CDRT1-207ENST00000583965 NPEPPSP55786 919 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 TBC1D8BQ0IIM8 1120 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 GRIK4Q16099 956 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 COL13A1Q5TAT6 717 aaPredicted RBP12.97□□□□□ -0.33
CDRT1-207ENST00000583965 PADI6Q6TGC4 694 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 SLC43A3Q8NBI5 491 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 GPT2Q8TD30 523 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 SLC7A3Q8WY07 619 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 DHX33Q9H6R0 707 aaKnown RBP12.97□□□□□ -0.33
CDRT1-207ENST00000583965 HDAC6Q9UBN7 1215 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 GTF2IRD1Q9UHL9 959 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 ALPK3Q96L96 1907 aa12.97□□□□□ -0.33
CDRT1-207ENST00000583965 GRIN2DO15399 1336 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 A0A087WWV3 80 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 C17orf102A2RUQ5 167 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 MBLAC1A4D2B0 266 aaPredicted RBP12.96□□□□□ -0.33
CDRT1-207ENST00000583965 ARVCFO00192 962 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 MAFO75444 373 aaPredicted RBP12.96□□□□□ -0.33
CDRT1-207ENST00000583965 SSBP05455 408 aaKnown RBP eCLIP12.96□□□□□ -0.33
CDRT1-207ENST00000583965 COL6A1P12109 1028 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 CYP11B2P19099 503 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 GUCY2CP25092 1073 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 POLGP54098 1239 aaPredicted RBP12.96□□□□□ -0.33
CDRT1-207ENST00000583965 CHMP4BP1P59074 171 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 ADAM17P78536 824 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 RINT1Q6NUQ1 792 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 CNNM4Q6P4Q7 775 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 C1orf186Q6ZWK4 172 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms