RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 USP26Q9BXU7 913 aa6.18□□□□□ -1.42
VAPA-207ENST00000583879 CNTNAP3Q9BZ76 1288 aa6.18□□□□□ -1.42
VAPA-207ENST00000583879 LMAN2LQ9H0V9 348 aa6.18□□□□□ -1.42
VAPA-207ENST00000583879 BCAS3Q9H6U6 928 aa6.18□□□□□ -1.42
VAPA-207ENST00000583879 SETD4Q9NVD3 440 aa6.18□□□□□ -1.42
VAPA-207ENST00000583879 PCDHA1Q9Y5I3 950 aa6.18□□□□□ -1.42
VAPA-207ENST00000583879 MYH7P12883 1935 aa6.18□□□□□ -1.42
VAPA-207ENST00000583879 NEDD4P46934 1319 aa6.18□□□□□ -1.42
VAPA-207ENST00000583879 CCDC171Q6TFL3 1326 aa6.18□□□□□ -1.42
VAPA-207ENST00000583879 LCTP09848 1927 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 KLRF2D3W0D1 207 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 GCOM1H8Y6P7 765 aaPredicted RBP6.17□□□□□ -1.42
VAPA-207ENST00000583879 STXBP3O00186 592 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 NOP56O00567 594 aaKnown RBP6.17□□□□□ -1.42
VAPA-207ENST00000583879 ENPP3O14638 875 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 ZBTB5O15062 677 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 GRM6O15303 877 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 PPP1R11O60927 126 aaPredicted RBP6.17□□□□□ -1.42
VAPA-207ENST00000583879 CHRNA1P02708 482 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 LGALS2P05162 132 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 CTSHP09668 335 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 LINC00271P0C7V0 271 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 POLR2MP0CAP2 368 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 UBA1P22314 1058 aaKnown RBP6.17□□□□□ -1.42
VAPA-207ENST00000583879 CCND2P30279 289 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 HOXA13P31271 388 aaPredicted RBP6.17□□□□□ -1.42
VAPA-207ENST00000583879 ICAM3P32942 547 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 CTNNB1P35222 781 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 GRM5P41594 1212 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 ADAM17P78536 824 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 HYAL1Q12794 435 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 TRAF1Q13077 416 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 ADAM15Q13444 863 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 NEDD9Q14511 834 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 STAG2Q8N3U4 1231 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 IL31RAQ8NI17 732 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 GPKOWQ92917 476 aaPredicted RBP eCLIP6.17□□□□□ -1.425e-9■□□□□ 9.7
VAPA-207ENST00000583879 RILPL2Q969X0 211 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 GPR20Q99678 358 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 C11orf84Q9BUA3 381 aaPredicted RBP6.17□□□□□ -1.42
VAPA-207ENST00000583879 KRT23Q9C075 422 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 IGFLR1Q9H665 355 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 EHMT1Q9H9B1 1298 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 MUTYHQ9UIF7 546 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 DNMT3LQ9UJW3 386 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 RWDD3Q9Y3V2 267 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 TET1Q8NFU7 2136 aa6.17□□□□□ -1.42
VAPA-207ENST00000583879 PALM3A6NDB9 673 aaPredicted RBP6.16□□□□□ -1.42
VAPA-207ENST00000583879 SPATA31C2B4DYI2 1134 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 STAM2O75886 525 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 DGKIO75912 1065 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 GTF2F1P35269 517 aaKnown RBP eCLIP6.16□□□□□ -1.42
VAPA-207ENST00000583879 CLK2P49760 499 aaKnown RBP6.16□□□□□ -1.42
VAPA-207ENST00000583879 MRPS9P82933 396 aaKnown RBP6.16□□□□□ -1.42
VAPA-207ENST00000583879 KRT76Q01546 638 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 SMAD4Q13485 552 aaKnown RBP6.16□□□□□ -1.42
VAPA-207ENST00000583879 CAMK1Q14012 370 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 SEC23AQ15436 765 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 CLUL1Q15846 466 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 PKN1Q16512 942 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.16□□□□□ -1.42
VAPA-207ENST00000583879 GNPTABQ3T906 1256 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 NAALADL2Q58DX5 795 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 IFIT1BQ5T764 474 aaKnown RBP6.16□□□□□ -1.42
VAPA-207ENST00000583879 CWC27Q6UX04 472 aaKnown RBP6.16□□□□□ -1.42
VAPA-207ENST00000583879 METTL7BQ6UX53 244 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 CYFIP1Q7L576 1253 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 FCHSD1Q86WN1 690 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 CLP1Q92989 425 aaKnown RBP6.16□□□□□ -1.42
VAPA-207ENST00000583879 PBXIP1Q96AQ6 731 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 ZNF689Q96CS4 500 aaPredicted RBP6.16□□□□□ -1.42
VAPA-207ENST00000583879 SNX27Q96L92 541 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 PRRX2Q99811 253 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 UBAC1Q9BSL1 405 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 PLVAPQ9BX97 442 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 RIOX1Q9H6W3 641 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 RTEL1Q9NZ71 1219 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 MAP10Q9P2G4 905 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 MAD2L2Q9UI95 211 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 CD207Q9UJ71 328 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 ZNF215Q9UL58 517 aaPredicted RBP6.16□□□□□ -1.42
VAPA-207ENST00000583879 PLAGL2Q9UPG8 496 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 NRCAMQ92823 1304 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 NCOR1O75376 2440 aa6.16□□□□□ -1.42
VAPA-207ENST00000583879 TMEM221A6NGB7 291 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 M0R296 226 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 LINC01565O15544 149 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 FIBPO43427 364 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 TBX10O75333 385 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 EYA4O95677 639 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 F12P00748 615 aaPredicted RBP6.15□□□□□ -1.42
VAPA-207ENST00000583879 MMP1P03956 469 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 GHRP10912 638 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 ARHGAP4P98171 946 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 SEMA3FQ13275 785 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 HDAC1Q13547 482 aaPredicted RBP6.15□□□□□ -1.42
VAPA-207ENST00000583879 BTG3Q14201 252 aaPredicted RBP6.15□□□□□ -1.42
VAPA-207ENST00000583879 LPIN1Q14693 890 aa6.15□□□□□ -1.42
VAPA-207ENST00000583879 IMMTQ16891 758 aaKnown RBP6.15□□□□□ -1.42
VAPA-207ENST00000583879 C4orf48Q5BLP8 95 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms