RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 PCDHA2Q9Y5H9 948 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 KDM3AQ9Y4C1 1321 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 KAT6AQ92794 2004 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 HIDE1A8MVS5 230 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 PRR5-ARHGAP8B1AHC4 643 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 RBAK-RBAKDNI3L0D1 243 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 PI15O43692 258 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 KINO60870 393 aaKnown RBP12.79□□□□□ -0.36
CASC3-208ENST00000583649 PDE4AP27815 886 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 GATMP50440 423 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 MRPS9P82933 396 aaKnown RBP12.79□□□□□ -0.36
CASC3-208ENST00000583649 ARHGAP8P85298 464 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 TMEM62Q0P6H9 643 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 IFIT1BQ5T764 474 aaKnown RBP12.79□□□□□ -0.36
CASC3-208ENST00000583649 PCNX4Q63HM2 1172 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 ELMSAN1Q6PJG2 1045 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 KCNT2Q6UVM3 1135 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 CABP7Q86V35 215 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 PPFIBP1Q86W92 1011 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 SMARCC2Q8TAQ2 1214 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 CHAMP1Q96JM3 812 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 ADAM2Q99965 735 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 TMEM117Q9H0C3 514 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 SMOC2Q9H3U7 446 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 ERVK-5Q9HDB9 667 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 NCDNQ9UBB6 729 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 WNT16Q9UBV4 365 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 CDV3Q9UKY7 258 aaKnown RBP12.79□□□□□ -0.36
CASC3-208ENST00000583649 GINS2Q9Y248 185 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 R4GN57 208 aa12.79□□□□□ -0.36
CASC3-208ENST00000583649 GVINP1Q7Z2Y8 2422 aa12.78□□□□□ -0.36
CASC3-208ENST00000583649 SMIM35A0A1B0GVV1 85 aa12.78□□□□□ -0.36
CASC3-208ENST00000583649 INSRRP14616 1297 aa12.78□□□□□ -0.36
CASC3-208ENST00000583649 ALDH7A1P49419 539 aaKnown RBP12.78□□□□□ -0.36
CASC3-208ENST00000583649 HNRNPUQ00839 825 aaKnown RBP eCLIP12.78□□□□□ -0.36
CASC3-208ENST00000583649 MARCH8Q5T0T0 291 aa12.78□□□□□ -0.36
CASC3-208ENST00000583649 FAM102BQ5T8I3 360 aa12.78□□□□□ -0.36
CASC3-208ENST00000583649 GPRASP2Q96D09 838 aa12.78□□□□□ -0.36
CASC3-208ENST00000583649 KRT23Q9C075 422 aa12.78□□□□□ -0.36
CASC3-208ENST00000583649 BCAS3Q9H6U6 928 aa12.78□□□□□ -0.36
CASC3-208ENST00000583649 CNNM2Q9H8M5 875 aa12.78□□□□□ -0.36
CASC3-208ENST00000583649 PLXNA4Q9HCM2 1894 aa12.77□□□□□ -0.37
CASC3-208ENST00000583649 PNMA6FA0A0J9YX94 578 aa12.77□□□□□ -0.37
CASC3-208ENST00000583649 C2orf71A6NGG8 1288 aa12.77□□□□□ -0.37
CASC3-208ENST00000583649 MAFGO15525 162 aa12.77□□□□□ -0.37
CASC3-208ENST00000583649 NPR3P17342 541 aa12.77□□□□□ -0.37
CASC3-208ENST00000583649 LMNB2Q03252 620 aa12.77□□□□□ -0.37
CASC3-208ENST00000583649 ENAHQ8N8S7 591 aaPredicted RBP12.77□□□□□ -0.37
CASC3-208ENST00000583649 RSPH1Q8WYR4 309 aa12.77□□□□□ -0.37
CASC3-208ENST00000583649 STAMQ92783 540 aa12.77□□□□□ -0.37
CASC3-208ENST00000583649 MTMR8Q96EF0 704 aa12.77□□□□□ -0.37
CASC3-208ENST00000583649 TMEM169Q96HH4 297 aa12.77□□□□□ -0.37
CASC3-208ENST00000583649 STK39Q9UEW8 545 aa12.77□□□□□ -0.37
CASC3-208ENST00000583649 FRMPD4Q14CM0 1322 aa12.77□□□□□ -0.37
CASC3-208ENST00000583649 KIAA1671Q9BY89 1806 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 MYH6P13533 1939 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 VPS13AQ96RL7 3174 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 DMDP11532 3685 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 CLASP2O75122 1294 aaKnown RBP12.76□□□□□ -0.37
CASC3-208ENST00000583649 CXCL14O95715 111 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 ZSCAN20P17040 1043 aaPredicted RBP12.76□□□□□ -0.37
CASC3-208ENST00000583649 SLC26A2P50443 739 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 MTMR1Q13613 665 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 TMEM266Q2M3C6 531 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 TBC1D10CQ8IV04 446 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 C1orf210Q8IVY1 113 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 NXPE3Q969Y0 559 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 TMX1Q9H3N1 280 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 CWH43Q9H720 699 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 SFXN1Q9H9B4 322 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 KCNK12Q9HB15 430 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 DPP7Q9UHL4 492 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 SIT1Q9Y3P8 196 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 NEDD4P46934 1319 aa12.76□□□□□ -0.37
CASC3-208ENST00000583649 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.75□□□□□ -0.37
CASC3-208ENST00000583649 C9IYK1 514 aa12.75□□□□□ -0.37
CASC3-208ENST00000583649 PPP1R11O60927 126 aaPredicted RBP12.75□□□□□ -0.37
CASC3-208ENST00000583649 WEE2P0C1S8 567 aa12.75□□□□□ -0.37
CASC3-208ENST00000583649 FGFR1P11362 822 aa12.75□□□□□ -0.37
CASC3-208ENST00000583649 SEMA3FQ13275 785 aa12.75□□□□□ -0.37
CASC3-208ENST00000583649 IMMTQ16891 758 aaKnown RBP12.75□□□□□ -0.37
CASC3-208ENST00000583649 STAG2Q8N3U4 1231 aa12.75□□□□□ -0.37
CASC3-208ENST00000583649 RIN2Q8WYP3 895 aaPredicted RBP12.75□□□□□ -0.37
CASC3-208ENST00000583649 RTKNQ9BST9 563 aa12.75□□□□□ -0.37
CASC3-208ENST00000583649 MRPL9Q9BYD2 267 aaKnown RBP12.75□□□□□ -0.37
CASC3-208ENST00000583649 ZSWIM5Q9P217 1185 aa12.75□□□□□ -0.37
CASC3-208ENST00000583649 ST3GAL5Q9UNP4 418 aa12.75□□□□□ -0.37
CASC3-208ENST00000583649 GSTTP1A0A1W2PQM5 241 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 ERICH2A1L162 156 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 B4E1Z4 1266 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 SPTLC1O15269 473 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 CFHP08603 1231 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 SP9P0CG40 484 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 SPECC1Q5M775 1068 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 VARS2Q5ST30 1063 aaKnown RBP12.74□□□□□ -0.37
CASC3-208ENST00000583649 PLPPR4Q7Z2D5 763 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 ZNF710Q8N1W2 664 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 ATRIPQ8WXE1 791 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 SHDQ96IW2 340 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 FAM227BQ96M60 508 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms