RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 WDR81Q562E7 1941 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 KPNA6O60684 536 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 ADAMTS4O75173 837 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 PGK1P00558 417 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 AFMP43652 599 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 BEX3Q00994 111 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 ANO5Q75V66 913 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 ANKLE1Q8NAG6 615 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 STAMQ92783 540 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 SYAP1Q96A49 352 aaPredicted RBP18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 CCDC34Q96HJ3 373 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 GDF15Q99988 308 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 NIFKQ9BYG3 293 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 TNMDQ9H2S6 317 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 XPNPEP3Q9NQH7 507 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 ERAP1Q9NZ08 941 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 SYNRGQ9UMZ2 1314 aa18.23■□□□□ 0.51
CDK5RAP3-228ENST00000583363 MYH9P35579 1960 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 MYADML2A6NDP7 307 aa18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 OATP04181 439 aa18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 C6orf222P0C671 652 aaPredicted RBP18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 AMPD3Q01432 767 aa18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 PRKCEQ02156 737 aa18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 DHX8Q14562 1220 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 PLCB4Q15147 1175 aa18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 GNASQ5JWF2 1037 aa18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 TRIM50Q86XT4 487 aa18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 CKAP2LQ8IYA6 745 aa18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 GRAMD1CQ8IYS0 662 aa18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 C7orf61Q8IZ16 206 aa18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 C7orf25Q9BPX7 421 aa18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 LRRC27Q9C0I9 530 aa18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 BHMT2Q9H2M3 363 aa18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 HOOK1Q9UJC3 728 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 ZMYND8Q9ULU4 1186 aaPredicted RBP18.22■□□□□ 0.51
CDK5RAP3-228ENST00000583363 TMEM150BA6NC51 233 aa18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 MYMKA6NI61 221 aa18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 H3BRB1 525 aa18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 GTPBP6O43824 516 aaPredicted RBP18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 ZEB2O60315 1214 aa18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 SSBP05455 408 aaKnown RBP eCLIP18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 MYL3P08590 195 aa18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 CST5P28325 142 aaPredicted RBP18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 RARRES1P49788 294 aa18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 POSTNQ15063 836 aa18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 ARSHQ5FYA8 562 aa18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 CCSAPQ6IQ19 270 aaPredicted RBP18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 RINT1Q6NUQ1 792 aa18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 TRMT1LQ7Z2T5 733 aaKnown RBP18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 ATP8B4Q8TF62 1192 aa18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 BBXQ8WY36 941 aaPredicted RBP18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 KAT2BQ92831 832 aa18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 FAM167AQ96KS9 214 aa18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 RNPEPQ9H4A4 650 aa18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 TUT1Q9H6E5 874 aaKnown RBP18.21■□□□□ 0.51
CDK5RAP3-228ENST00000583363 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 ARHGEF35A5YM69 484 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 HBP1O60381 514 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 MYL1P05976 194 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 PRR29P0C7W0 189 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 ZNF286BP0CG31 522 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 CYP11B2P19099 503 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 MARK3P27448 753 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 BMP8BP34820 402 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 NPEPPSP55786 919 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 DPYDQ12882 1025 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 PNOCQ13519 176 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 CUL4BQ13620 913 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 TARBP2Q15633 366 aaKnown RBP18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 XKR9Q5GH70 373 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 PLA2G4FQ68DD2 849 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 CNNM4Q6P4Q7 775 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 RBM43Q6ZSC3 357 aaKnown RBP18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 C1orf186Q6ZWK4 172 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 SLC17A8Q8NDX2 589 aa18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 SEPT9Q9UHD8 586 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 ZNF215Q9UL58 517 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-228ENST00000583363 HAS3O00219 553 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 LETM1O95202 739 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 F2P00734 622 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 CASP1P29466 404 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 PURAQ00577 322 aaKnown RBP18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 KCNA10Q16322 511 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 PADI6Q6TGC4 694 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 RNF180Q86T96 592 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 GPBP1Q86WP2 473 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 CEP170P1Q96L14 293 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 CEP89Q96ST8 783 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 SH2D3AQ9BRG2 576 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 RUSC1Q9BVN2 902 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 TRIM9Q9C026 710 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 BLZF1Q9H2G9 400 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 CYP26B1Q9NR63 512 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 BMP2KQ9NSY1 1161 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 KIAA1468Q9P260 1216 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 OGDHLQ9ULD0 1010 aa18.19■□□□□ 0.5
CDK5RAP3-228ENST00000583363 SYN1P17600 705 aa18.18■□□□□ 0.5
CDK5RAP3-228ENST00000583363 SARSP49591 514 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-228ENST00000583363 PSEN2P49810 448 aa18.18■□□□□ 0.5
CDK5RAP3-228ENST00000583363 LRRC41Q15345 812 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms