RNA–Protein interactions for RNA: ENST00000583070.5

NUP85-220, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-220ENST00000583070 TMEM39AQ9NV64 488 aa12.02□□□□□ -0.49
NUP85-220ENST00000583070 RCOR1Q9UKL0 485 aa12.02□□□□□ -0.49
NUP85-220ENST00000583070 KDM3AQ9Y4C1 1321 aa12.02□□□□□ -0.49
NUP85-220ENST00000583070 TRIM43BA6NCK2 446 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 CAND2O75155 1236 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 C22orf31O95567 290 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 CYP2C9P11712 490 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 CDC25AP30304 524 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 CCT6AP40227 531 aaKnown RBP12.01□□□□□ -0.49
NUP85-220ENST00000583070 KRT85P78386 507 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 TRIM71Q2Q1W2 868 aaKnown RBP12.01□□□□□ -0.49
NUP85-220ENST00000583070 FOXD4L6Q3SYB3 417 aaPredicted RBP12.01□□□□□ -0.49
NUP85-220ENST00000583070 MTHFD1LQ6UB35 978 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 FOXD4L3Q6VB84 417 aaPredicted RBP12.01□□□□□ -0.49
NUP85-220ENST00000583070 OTUD6AQ7L8S5 288 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 SH3RF1Q7Z6J0 888 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 CCDC155Q8N6L0 562 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 KRI1Q8N9T8 703 aaKnown RBP12.01□□□□□ -0.49
NUP85-220ENST00000583070 DHX38Q92620 1227 aaKnown RBP12.01□□□□□ -0.49
NUP85-220ENST00000583070 TRIM43Q96BQ3 446 aaPredicted RBP12.01□□□□□ -0.49
NUP85-220ENST00000583070 NACC1Q96RE7 527 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 HIPK3Q9H422 1215 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 CYP26B1Q9NR63 512 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 ANKEF1Q9NU02 776 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 CHMP5Q9NZZ3 219 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 PRKAG2Q9UGJ0 569 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 SEPT9Q9UHD8 586 aaPredicted RBP12.01□□□□□ -0.49
NUP85-220ENST00000583070 DBR1Q9UK59 544 aaKnown RBP12.01□□□□□ -0.49
NUP85-220ENST00000583070 PCDHA2Q9Y5H9 948 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 MICAL3Q7RTP6 2002 aa12.01□□□□□ -0.49
NUP85-220ENST00000583070 IGKV6-21A0A0C4DH24 114 aa12□□□□□ -0.49
NUP85-220ENST00000583070 SMIM35A0A1B0GVV1 85 aa12□□□□□ -0.49
NUP85-220ENST00000583070 TMEM150BA6NC51 233 aa12□□□□□ -0.49
NUP85-220ENST00000583070 DDX11L8A8MPP1 907 aa12□□□□□ -0.49
NUP85-220ENST00000583070 ZBTB39O15060 712 aa12□□□□□ -0.49
NUP85-220ENST00000583070 MAGEB2O15479 319 aa12□□□□□ -0.49
NUP85-220ENST00000583070 TIMP1P01033 207 aa12□□□□□ -0.49
NUP85-220ENST00000583070 IGBP1P78318 339 aa12□□□□□ -0.49
NUP85-220ENST00000583070 TBC1D8BQ0IIM8 1120 aa12□□□□□ -0.49
NUP85-220ENST00000583070 BFSP2Q13515 415 aa12□□□□□ -0.49
NUP85-220ENST00000583070 ECM1Q16610 540 aa12□□□□□ -0.49
NUP85-220ENST00000583070 PLA2G4FQ68DD2 849 aa12□□□□□ -0.49
NUP85-220ENST00000583070 POTEGQ6S5H5 508 aa12□□□□□ -0.49
NUP85-220ENST00000583070 TRMT1LQ7Z2T5 733 aaKnown RBP12□□□□□ -0.49
NUP85-220ENST00000583070 EXOC8Q8IYI6 725 aa12□□□□□ -0.49
NUP85-220ENST00000583070 LINC01465Q8N7H1 131 aa12□□□□□ -0.49
NUP85-220ENST00000583070 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
NUP85-220ENST00000583070 WNT8BQ93098 351 aa12□□□□□ -0.49
NUP85-220ENST00000583070 CCSER1Q9C0I3 900 aa12□□□□□ -0.49
NUP85-220ENST00000583070 SCAND2PQ9GZW5 306 aaPredicted RBP12□□□□□ -0.49
NUP85-220ENST00000583070 NT5C3AQ9H0P0 336 aa12□□□□□ -0.49
NUP85-220ENST00000583070 CSRNP2Q9H175 543 aa12□□□□□ -0.49
NUP85-220ENST00000583070 PRDM5Q9NQX1 630 aaPredicted RBP12□□□□□ -0.49
NUP85-220ENST00000583070 LAMA3Q16787 3333 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 CUTAO60888 179 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 MAFO75444 373 aaPredicted RBP11.99□□□□□ -0.49
NUP85-220ENST00000583070 CKBP12277 381 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 RAG1P15918 1043 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 ITGB8P26012 769 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 KLRC1P26715 233 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 RFC5P40937 340 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 UBA7P41226 1012 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 RARRES1P49788 294 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 NPEPPSP55786 919 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 GRB10Q13322 594 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 MTERF2Q49AM1 385 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 TMEM119Q4V9L6 283 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 AXDND1Q5T1B0 1012 aaPredicted RBP11.99□□□□□ -0.49
NUP85-220ENST00000583070 RUFY4Q6ZNE9 571 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 CABP7Q86V35 215 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 PIGOQ8TEQ8 1089 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 LEO1Q8WVC0 666 aaPredicted RBP11.99□□□□□ -0.49
NUP85-220ENST00000583070 CEP170P1Q96L14 293 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 SPATA32Q96LK8 384 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 CLIC6Q96NY7 704 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 PNMA5Q96PV4 448 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 JPH2Q9BR39 696 aaPredicted RBP11.99□□□□□ -0.49
NUP85-220ENST00000583070 WNT8AQ9H1J5 351 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 DHX33Q9H6R0 707 aaKnown RBP11.99□□□□□ -0.49
NUP85-220ENST00000583070 DDX19AQ9NUU7 478 aaKnown RBP11.99□□□□□ -0.49
NUP85-220ENST00000583070 KIAA1024Q9UPX6 916 aa11.99□□□□□ -0.49
NUP85-220ENST00000583070 UMODL1Q5DID0 1318 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 GAS2O43903 313 aaKnown RBP11.98□□□□□ -0.49
NUP85-220ENST00000583070 SELPP16109 830 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 ME1P48163 572 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 XKR9Q5GH70 373 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 FAM26DQ5JW98 314 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 MFSD5Q6N075 450 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 TRAF7Q6Q0C0 670 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 USP49Q70CQ1 688 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 RSPH3Q86UC2 560 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 KIAA0319LQ8IZA0 1049 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 NME8Q8N427 588 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 RETREG2Q8NC44 543 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 SLC7A3Q8WY07 619 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 SYMPKQ92797 1274 aaKnown RBP11.98□□□□□ -0.49
NUP85-220ENST00000583070 ZBTB10Q96DT7 871 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 CALML4Q96GE6 196 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 EPSTI1Q96J88 318 aa11.98□□□□□ -0.49
NUP85-220ENST00000583070 CHAMP1Q96JM3 812 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms