RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 C1orf112Q9NSG2 853 aa10.69□□□□□ -0.7
GGA3-212ENST00000582376 SMG5Q9UPR3 1016 aaKnown RBP10.69□□□□□ -0.7
GGA3-212ENST00000582376 PCDHA1Q9Y5I3 950 aa10.69□□□□□ -0.7
GGA3-212ENST00000582376 FASNP49327 2511 aaKnown RBP10.68□□□□□ -0.7
GGA3-212ENST00000582376 DENND3A2RUS2 1198 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 OPLAHO14841 1288 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 SLC30A4O14863 429 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 DHX16O60231 1041 aaKnown RBP10.68□□□□□ -0.7
GGA3-212ENST00000582376 TGM1P22735 817 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 HOXA13P31271 388 aaPredicted RBP10.68□□□□□ -0.7
GGA3-212ENST00000582376 IGBP1P78318 339 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 TMEM62Q0P6H9 643 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 TMEM266Q2M3C6 531 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 TMC5Q6UXY8 1006 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 FAM43BQ6ZT52 329 aaPredicted RBP10.68□□□□□ -0.7
GGA3-212ENST00000582376 SLC24A5Q71RS6 500 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 CABP7Q86V35 215 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 SAMD3Q8N6K7 520 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 NETO1Q8TDF5 533 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 CELF4Q9BZC1 486 aaKnown RBP10.68□□□□□ -0.7
GGA3-212ENST00000582376 ATP6V0A4Q9HBG4 840 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 SPG21Q9NZD8 308 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 GMEB2Q9UKD1 530 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 TELO2Q9Y4R8 837 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 PCDHGA2Q9Y5H1 932 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 DENND4AQ7Z401 1863 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 CACNA1IQ9P0X4 2223 aa10.68□□□□□ -0.7
GGA3-212ENST00000582376 WDR87Q6ZQQ6 2873 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 SPATA31C2B4DYI2 1134 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 C9IYK1 514 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 FOXP2O15409 715 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 FIBPO43427 364 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 LAMTOR5O43504 91 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 MGEA5O60502 916 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 STAM2O75886 525 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 CXCL14O95715 111 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 FGFR1P11362 822 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 SRFP11831 508 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 EPCAMP16422 314 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 MARK3P27448 753 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 PBX3P40426 434 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 ZMYM1Q5SVZ6 1142 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 GPR149Q86SP6 731 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 SIRT2Q8IXJ6 389 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 GLG1Q92896 1179 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 GPATCH3Q96I76 525 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 ADAM2Q99965 735 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 AMNQ9BXJ7 453 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 LRRCC1Q9C099 1032 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 TMEM117Q9H0C3 514 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 EPC1Q9H2F5 836 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 SFXN1Q9H9B4 322 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 VAT1LQ9HCJ6 419 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 PARD6AQ9NPB6 346 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 ARHGEF3Q9NR81 526 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 RGS18Q9NS28 235 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 TMEM161AQ9NX61 479 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 ERAP1Q9NZ08 941 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 FBXO4Q9UKT5 387 aa10.67□□□□□ -0.7
GGA3-212ENST00000582376 KDM3AQ9Y4C1 1321 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.66□□□□□ -0.7
GGA3-212ENST00000582376 RRN3P2A6NIE6 340 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 SOBPA7XYQ1 873 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 SMARCA5O60264 1052 aaPredicted RBP10.66□□□□□ -0.7
GGA3-212ENST00000582376 TBC1D4O60343 1298 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 GLULP15104 373 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 KCNA4P22459 653 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 PMLP29590 882 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 TCF7P36402 384 aaPredicted RBP10.66□□□□□ -0.7
GGA3-212ENST00000582376 CSTF1Q05048 431 aaKnown RBP10.66□□□□□ -0.7
GGA3-212ENST00000582376 SEMA3FQ13275 785 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 LETM2Q2VYF4 491 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 ASPRV1Q53RT3 343 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 ODR4Q5SWX8 454 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 FCHSD1Q86WN1 690 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 LRRC43Q8N309 656 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 SLC44A3Q8N4M1 653 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 PJA1Q8NG27 643 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 FEZF2Q8TBJ5 459 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 GPR152Q8TDT2 470 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 RSAD2Q8WXG1 361 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 ZBTB10Q96DT7 871 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 INPP4AQ96PE3 977 aaPredicted RBP10.66□□□□□ -0.7
GGA3-212ENST00000582376 FOXQ1Q9C009 403 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 JMJD4Q9H9V9 463 aa10.66□□□□□ -0.7
GGA3-212ENST00000582376 SPATA6Q9NWH7 488 aaPredicted RBP10.66□□□□□ -0.7
GGA3-212ENST00000582376 MYH6P13533 1939 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 LOXHD1Q8IVV2 1947 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 GCOM1H8Y6P7 765 aaPredicted RBP10.65□□□□□ -0.7
GGA3-212ENST00000582376 HOXA2O43364 376 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 RPS6KA5O75582 802 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 PROS1P07225 676 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 POLR2MP0CAP2 368 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 GBP2P32456 591 aaPredicted RBP10.65□□□□□ -0.7
GGA3-212ENST00000582376 MRPS9P82933 396 aaKnown RBP10.65□□□□□ -0.7
GGA3-212ENST00000582376 KRT76Q01546 638 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 GIT2Q14161 759 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 TSHZ3Q63HK5 1081 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 DCLRE1AQ6PJP8 1040 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms