RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 CLP1Q92989 425 aaKnown RBP23.69■■□□□ 1.38
CCDC42-203ENST00000581598 PADI3Q9ULW8 664 aa23.69■■□□□ 1.38
CCDC42-203ENST00000581598 CPLX1O14810 134 aa23.68■■□□□ 1.38
CCDC42-203ENST00000581598 DGKIO75912 1065 aa23.68■■□□□ 1.38
CCDC42-203ENST00000581598 RB1P06400 928 aa23.68■■□□□ 1.38
CCDC42-203ENST00000581598 TMEM62Q0P6H9 643 aa23.68■■□□□ 1.38
CCDC42-203ENST00000581598 PAK2Q13177 524 aa23.68■■□□□ 1.38
CCDC42-203ENST00000581598 GPM6BQ13491 265 aa23.68■■□□□ 1.38
CCDC42-203ENST00000581598 CPLX2Q6PUV4 134 aaKnown RBP23.68■■□□□ 1.38
CCDC42-203ENST00000581598 RTN4RL1Q86UN2 441 aaPredicted RBP23.68■■□□□ 1.38
CCDC42-203ENST00000581598 KIAA0319LQ8IZA0 1049 aa23.68■■□□□ 1.38
CCDC42-203ENST00000581598 DAGLBQ8NCG7 672 aa23.68■■□□□ 1.38
CCDC42-203ENST00000581598 RIT2Q99578 217 aa23.68■■□□□ 1.38
CCDC42-203ENST00000581598 UPF3BQ9BZI7 483 aaKnown RBP23.68■■□□□ 1.38
CCDC42-203ENST00000581598 PCDHA4Q9UN74 947 aa23.68■■□□□ 1.38
CCDC42-203ENST00000581598 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.67■■□□□ 1.38
CCDC42-203ENST00000581598 WDR64B1ANS9 1081 aa23.67■■□□□ 1.38
CCDC42-203ENST00000581598 TIGD5Q53EQ6 642 aa23.67■■□□□ 1.38
CCDC42-203ENST00000581598 GALNT17Q6IS24 598 aa23.67■■□□□ 1.38
CCDC42-203ENST00000581598 NPAS4Q8IUM7 802 aa23.67■■□□□ 1.38
CCDC42-203ENST00000581598 FAM167AQ96KS9 214 aa23.67■■□□□ 1.38
CCDC42-203ENST00000581598 PDRG1Q9NUG6 133 aa23.67■■□□□ 1.38
CCDC42-203ENST00000581598 CEP131Q9UPN4 1083 aa23.67■■□□□ 1.38
CCDC42-203ENST00000581598 M0R2N6 131 aa23.66■■□□□ 1.38
CCDC42-203ENST00000581598 MSH4O15457 936 aa23.66■■□□□ 1.38
CCDC42-203ENST00000581598 C22orf31O95567 290 aa23.66■■□□□ 1.38
CCDC42-203ENST00000581598 ODR4Q5SWX8 454 aa23.66■■□□□ 1.38
CCDC42-203ENST00000581598 SLC5A5Q92911 643 aa23.66■■□□□ 1.38
CCDC42-203ENST00000581598 UIMC1Q96RL1 719 aa23.66■■□□□ 1.38
CCDC42-203ENST00000581598 GABBR1Q9UBS5 961 aa23.66■■□□□ 1.38
CCDC42-203ENST00000581598 CYP3A7-CYP3A51PA0A087WV96 503 aa23.65■■□□□ 1.38
CCDC42-203ENST00000581598 STAG3L1P0CL83 205 aa23.65■■□□□ 1.38
CCDC42-203ENST00000581598 CYP3A7P24462 503 aa23.65■■□□□ 1.38
CCDC42-203ENST00000581598 BMPR1AP36894 532 aa23.65■■□□□ 1.38
CCDC42-203ENST00000581598 Q4G0T1 1027 aa23.65■■□□□ 1.38
CCDC42-203ENST00000581598 MOXD1Q6UVY6 613 aa23.65■■□□□ 1.38
CCDC42-203ENST00000581598 CKAP2LQ8IYA6 745 aa23.65■■□□□ 1.38
CCDC42-203ENST00000581598 CMTR2Q8IYT2 770 aaKnown RBP23.65■■□□□ 1.38
CCDC42-203ENST00000581598 BLIDQ8IZY5 108 aa23.65■■□□□ 1.38
CCDC42-203ENST00000581598 TBCKQ8TEA7 893 aa23.65■■□□□ 1.38
CCDC42-203ENST00000581598 C11orf84Q9BUA3 381 aaPredicted RBP23.65■■□□□ 1.38
CCDC42-203ENST00000581598 LMAN2LQ9H0V9 348 aa23.65■■□□□ 1.38
CCDC42-203ENST00000581598 UBE2ZQ9H832 354 aaPredicted RBP23.65■■□□□ 1.38
CCDC42-203ENST00000581598 ERVK-5Q9HDB9 667 aa23.65■■□□□ 1.38
CCDC42-203ENST00000581598 MAGEB2O15479 319 aa23.64■■□□□ 1.37
CCDC42-203ENST00000581598 SFNP31947 248 aa23.64■■□□□ 1.37
CCDC42-203ENST00000581598 CTNNB1P35222 781 aa23.64■■□□□ 1.37
CCDC42-203ENST00000581598 BTG3Q14201 252 aaPredicted RBP23.64■■□□□ 1.37
CCDC42-203ENST00000581598 NPY5RQ15761 445 aa23.64■■□□□ 1.37
CCDC42-203ENST00000581598 TMX1Q9H3N1 280 aa23.64■■□□□ 1.37
CCDC42-203ENST00000581598 DISC1Q9NRI5 854 aa23.64■■□□□ 1.37
CCDC42-203ENST00000581598 ATG2AQ2TAZ0 1938 aa23.64■■□□□ 1.37
CCDC42-203ENST00000581598 BDP1A6H8Y1 2624 aa23.63■■□□□ 1.37
CCDC42-203ENST00000581598 GAS7O60861 476 aa23.63■■□□□ 1.37
CCDC42-203ENST00000581598 RPS6KA5O75582 802 aa23.63■■□□□ 1.37
CCDC42-203ENST00000581598 JAK3P52333 1124 aa23.63■■□□□ 1.37
CCDC42-203ENST00000581598 CRYBB1P53674 252 aaPredicted RBP23.63■■□□□ 1.37
CCDC42-203ENST00000581598 ANAPC15P60006 121 aa23.63■■□□□ 1.37
CCDC42-203ENST00000581598 ZNF710Q8N1W2 664 aa23.63■■□□□ 1.37
CCDC42-203ENST00000581598 BANK1Q8NDB2 785 aa23.63■■□□□ 1.37
CCDC42-203ENST00000581598 RDM1Q8NG50 284 aa23.63■■□□□ 1.37
CCDC42-203ENST00000581598 MBOAT7Q96N66 472 aa23.63■■□□□ 1.37
CCDC42-203ENST00000581598 LARP6Q9BRS8 491 aaKnown RBP23.63■■□□□ 1.37
CCDC42-203ENST00000581598 PLVAPQ9BX97 442 aa23.63■■□□□ 1.37
CCDC42-203ENST00000581598 TEKT3Q9BXF9 490 aa23.63■■□□□ 1.37
CCDC42-203ENST00000581598 RNF216Q9NWF9 866 aaPredicted RBP23.63■■□□□ 1.37
CCDC42-203ENST00000581598 NOC2LQ9Y3T9 749 aaKnown RBP23.63■■□□□ 1.37
CCDC42-203ENST00000581598 SAMM50Q9Y512 469 aa23.63■■□□□ 1.37
CCDC42-203ENST00000581598 KIAA1671Q9BY89 1806 aa23.62■■□□□ 1.37
CCDC42-203ENST00000581598 CDKL5O76039 1030 aa23.62■■□□□ 1.37
CCDC42-203ENST00000581598 STK3Q13188 491 aa23.62■■□□□ 1.37
CCDC42-203ENST00000581598 COL19A1Q14993 1142 aa23.62■■□□□ 1.37
CCDC42-203ENST00000581598 LEXMQ3ZCV2 418 aa23.62■■□□□ 1.37
CCDC42-203ENST00000581598 LRCH2Q5VUJ6 765 aa23.62■■□□□ 1.37
CCDC42-203ENST00000581598 LINC01465Q8N7H1 131 aa23.62■■□□□ 1.37
CCDC42-203ENST00000581598 TMEM40Q8WWA1 233 aa23.62■■□□□ 1.37
CCDC42-203ENST00000581598 NECAB3Q96P71 396 aaPredicted RBP23.62■■□□□ 1.37
CCDC42-203ENST00000581598 NSUN3Q9H649 340 aaKnown RBP23.62■■□□□ 1.37
CCDC42-203ENST00000581598 CDHR5Q9HBB8 845 aa23.62■■□□□ 1.37
CCDC42-203ENST00000581598 NRBP2Q9NSY0 501 aa23.62■■□□□ 1.37
CCDC42-203ENST00000581598 STK36Q9NRP7 1315 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 GPR182O15218 404 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 ZNF862O60290 1169 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 GPR32O75388 356 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 PSMD10O75832 226 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 OATP04181 439 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 SARSP49591 514 aaKnown RBP23.61■■□□□ 1.37
CCDC42-203ENST00000581598 NFX1Q12986 1120 aaKnown RBP23.61■■□□□ 1.37
CCDC42-203ENST00000581598 TMEM266Q2M3C6 531 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 NAALADL2Q58DX5 795 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 B3GNT9Q6UX72 402 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 P2RX5Q93086 422 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 UNC45AQ9H3U1 944 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 RGS18Q9NS28 235 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 C1orf112Q9NSG2 853 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 GINS2Q9Y248 185 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 MYO7AQ13402 2215 aa23.61■■□□□ 1.37
CCDC42-203ENST00000581598 COL9A1P20849 921 aa23.6■■□□□ 1.37
CCDC42-203ENST00000581598 SCRN1Q12765 414 aa23.6■■□□□ 1.37
CCDC42-203ENST00000581598 NONOQ15233 471 aaKnown RBP eCLIP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms