RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 CUTAO60888 179 aa5.13□□□□□ -1.59
SMG8-205ENST00000580798 RAB11FIP3O75154 756 aa5.13□□□□□ -1.59
SMG8-205ENST00000580798 DNAJA1P31689 397 aaKnown RBP5.13□□□□□ -1.59
SMG8-205ENST00000580798 TBR1Q16650 682 aa5.13□□□□□ -1.59
SMG8-205ENST00000580798 KIZQ2M2Z5 673 aa5.13□□□□□ -1.59
SMG8-205ENST00000580798 HSP90AB2PQ58FF8 381 aa5.13□□□□□ -1.59
SMG8-205ENST00000580798 ANKS3Q6ZW76 656 aa5.13□□□□□ -1.59
SMG8-205ENST00000580798 ULK2Q8IYT8 1036 aa5.13□□□□□ -1.59
SMG8-205ENST00000580798 DCAF4Q8WV16 495 aa5.13□□□□□ -1.59
SMG8-205ENST00000580798 SECISBP2LQ93073 1101 aaKnown RBP5.13□□□□□ -1.59
SMG8-205ENST00000580798 OSBP2Q969R2 916 aa5.13□□□□□ -1.59
SMG8-205ENST00000580798 SGSM3Q96HU1 749 aa5.13□□□□□ -1.59
SMG8-205ENST00000580798 KCNJ15Q99712 375 aa5.13□□□□□ -1.59
SMG8-205ENST00000580798 PRRX2Q99811 253 aa5.13□□□□□ -1.59
SMG8-205ENST00000580798 C12orf65Q9H3J6 166 aaKnown RBP5.13□□□□□ -1.59
SMG8-205ENST00000580798 TMA7Q9Y2S6 64 aaKnown RBP5.13□□□□□ -1.59
SMG8-205ENST00000580798 NKRFO15226 690 aaKnown RBP eCLIP5.12□□□□□ -1.59
SMG8-205ENST00000580798 KLF4O43474 513 aa5.12□□□□□ -1.59
SMG8-205ENST00000580798 SH3BP5O60239 455 aa5.12□□□□□ -1.59
SMG8-205ENST00000580798 FGFR1P11362 822 aa5.12□□□□□ -1.59
SMG8-205ENST00000580798 GNAT1P11488 350 aa5.12□□□□□ -1.59
SMG8-205ENST00000580798 PABPC1P11940 636 aaKnown RBP5.12□□□□□ -1.59
SMG8-205ENST00000580798 MSX2P35548 267 aaPredicted RBP5.12□□□□□ -1.59
SMG8-205ENST00000580798 RPS19P39019 145 aaKnown RBP5.12□□□□□ -1.59
SMG8-205ENST00000580798 HABP4Q5JVS0 413 aaKnown RBP5.12□□□□□ -1.59
SMG8-205ENST00000580798 YOD1Q5VVQ6 348 aaPredicted RBP5.12□□□□□ -1.59
SMG8-205ENST00000580798 CFHR4Q92496 578 aa5.12□□□□□ -1.59
SMG8-205ENST00000580798 SLC2A4RGQ9NR83 387 aa5.12□□□□□ -1.59
SMG8-205ENST00000580798 AURKAIP1Q9NWT8 199 aaPredicted RBP5.12□□□□□ -1.59
SMG8-205ENST00000580798 REXO2Q9Y3B8 237 aaKnown RBP5.12□□□□□ -1.59
SMG8-205ENST00000580798 PEX14O75381 377 aa5.11□□□□□ -1.59
SMG8-205ENST00000580798 IBSPP21815 317 aaPredicted RBP5.11□□□□□ -1.59
SMG8-205ENST00000580798 ATXN1P54253 815 aaKnown RBP5.11□□□□□ -1.59
SMG8-205ENST00000580798 GPR85P60893 370 aa5.11□□□□□ -1.59
SMG8-205ENST00000580798 SPIRE1Q08AE8 756 aa5.11□□□□□ -1.59
SMG8-205ENST00000580798 NFYCQ13952 458 aa5.11□□□□□ -1.59
SMG8-205ENST00000580798 STYK1Q6J9G0 422 aa5.11□□□□□ -1.59
SMG8-205ENST00000580798 CASC1Q6TDU7 716 aa5.11□□□□□ -1.59
SMG8-205ENST00000580798 NSMFQ6X4W1 530 aa5.11□□□□□ -1.59
SMG8-205ENST00000580798 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.11□□□□□ -1.59
SMG8-205ENST00000580798 SMC5Q8IY18 1101 aa5.11□□□□□ -1.59
SMG8-205ENST00000580798 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.11□□□□□ -1.59
SMG8-205ENST00000580798 ZNF622Q969S3 477 aaKnown RBP eCLIP5.11□□□□□ -1.59
SMG8-205ENST00000580798 SCYL1Q96KG9 808 aa5.11□□□□□ -1.59
SMG8-205ENST00000580798 ZFYVE21Q9BQ24 234 aa5.11□□□□□ -1.59
SMG8-205ENST00000580798 TTPALQ9BTX7 342 aa5.11□□□□□ -1.59
SMG8-205ENST00000580798 PLA2G3Q9NZ20 509 aa5.11□□□□□ -1.59
SMG8-205ENST00000580798 hCG_2014768A0A024R1R8 64 aa5.1□□□□□ -1.59
SMG8-205ENST00000580798 IQCA1LA6NCM1 817 aa5.1□□□□□ -1.59
SMG8-205ENST00000580798 ACOT7O00154 380 aa5.1□□□□□ -1.59
SMG8-205ENST00000580798 FOXN1O15353 648 aa5.1□□□□□ -1.59
SMG8-205ENST00000580798 ARHGAP6O43182 974 aa5.1□□□□□ -1.59
SMG8-205ENST00000580798 CREB3O43889 395 aa5.1□□□□□ -1.59
SMG8-205ENST00000580798 SOD2P04179 222 aa5.1□□□□□ -1.59
SMG8-205ENST00000580798 BMP5P22003 454 aa5.1□□□□□ -1.59
SMG8-205ENST00000580798 DEKP35659 375 aaKnown RBP5.1□□□□□ -1.59
SMG8-205ENST00000580798 ETV4P43268 484 aa5.1□□□□□ -1.59
SMG8-205ENST00000580798 IGBP1P78318 339 aa5.1□□□□□ -1.59
SMG8-205ENST00000580798 CNGB1Q14028 1251 aaPredicted RBP5.1□□□□□ -1.59
SMG8-205ENST00000580798 KRBA2Q6ZNG9 492 aa5.1□□□□□ -1.59
SMG8-205ENST00000580798 SLC39A2Q9NP94 309 aa5.1□□□□□ -1.59
SMG8-205ENST00000580798 HECAQ9UBI9 543 aaPredicted RBP5.1□□□□□ -1.59
SMG8-205ENST00000580798 PUF60Q9UHX1 559 aaKnown RBP5.1□□□□□ -1.59
SMG8-205ENST00000580798 DSEQ9UL01 958 aa5.1□□□□□ -1.59
SMG8-205ENST00000580798 NUB1Q9Y5A7 615 aa5.1□□□□□ -1.59
SMG8-205ENST00000580798 ASXL2Q76L83 1435 aa5.09□□□□□ -1.59
SMG8-205ENST00000580798 TRAV20A0A0B4J274 112 aa5.09□□□□□ -1.59
SMG8-205ENST00000580798 HSP90AA1P07900 732 aaKnown RBP5.09□□□□□ -1.59
SMG8-205ENST00000580798 EPHA5P54756 1037 aa5.09□□□□□ -1.59
SMG8-205ENST00000580798 IFRD2Q12894 506 aaPredicted RBP5.09□□□□□ -1.59
SMG8-205ENST00000580798 CSRP2Q16527 193 aa5.09□□□□□ -1.59
SMG8-205ENST00000580798 CCDC142Q17RM4 750 aa5.09□□□□□ -1.59
SMG8-205ENST00000580798 RINLQ6ZS11 566 aa5.09□□□□□ -1.59
SMG8-205ENST00000580798 KCTD1Q719H9 257 aa5.09□□□□□ -1.59
SMG8-205ENST00000580798 NOP9Q86U38 636 aaKnown RBP5.09□□□□□ -1.59
SMG8-205ENST00000580798 TMPRSS6Q8IU80 811 aa5.09□□□□□ -1.59
SMG8-205ENST00000580798 CCAR1Q8IX12 1150 aaKnown RBP5.09□□□□□ -1.59
SMG8-205ENST00000580798 IFNL3Q8IZI9 196 aa5.09□□□□□ -1.59
SMG8-205ENST00000580798 NME8Q8N427 588 aa5.09□□□□□ -1.59
SMG8-205ENST00000580798 ST13P5Q8NFI4 369 aaPredicted RBP5.09□□□□□ -1.59
SMG8-205ENST00000580798 CD244Q9BZW8 370 aa5.09□□□□□ -1.59
SMG8-205ENST00000580798 KIAA1683Q9H0B3 1180 aa5.09□□□□□ -1.59
SMG8-205ENST00000580798 IPPKQ9H8X2 491 aa5.09□□□□□ -1.59
SMG8-205ENST00000580798 GIT1Q9Y2X7 761 aa5.09□□□□□ -1.59
SMG8-205ENST00000580798 FAM47E-STBD1D6RA91 191 aa5.08□□□□□ -1.6
SMG8-205ENST00000580798 CCER2I3L3R5 266 aa5.08□□□□□ -1.6
SMG8-205ENST00000580798 FBLP22087 321 aaKnown RBP5.08□□□□□ -1.6
SMG8-205ENST00000580798 GJA4P35212 333 aa5.08□□□□□ -1.6
SMG8-205ENST00000580798 NAALADL2Q58DX5 795 aa5.08□□□□□ -1.6
SMG8-205ENST00000580798 GIMAP6Q6P9H5 292 aa5.08□□□□□ -1.6
SMG8-205ENST00000580798 TSHZ1Q6ZSZ6 1077 aa5.08□□□□□ -1.6
SMG8-205ENST00000580798 LARP4Q71RC2 724 aaKnown RBP eCLIP5.08□□□□□ -1.6
SMG8-205ENST00000580798 SGMS1Q86VZ5 419 aa5.08□□□□□ -1.6
SMG8-205ENST00000580798 LRRC47Q8N1G4 583 aaKnown RBP5.08□□□□□ -1.6
SMG8-205ENST00000580798 SLC43A3Q8NBI5 491 aa5.08□□□□□ -1.6
SMG8-205ENST00000580798 SH3RF2Q8TEC5 729 aa5.08□□□□□ -1.6
SMG8-205ENST00000580798 GMLQ99445 158 aa5.08□□□□□ -1.6
SMG8-205ENST00000580798 ZDHHC5Q9C0B5 715 aa5.08□□□□□ -1.6
SMG8-205ENST00000580798 MSL2Q9HCI7 577 aa5.08□□□□□ -1.6
SMG8-205ENST00000580798 SLC52A1Q9NWF4 448 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms