RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 CYP46A1Q9Y6A2 500 aa12.61□□□□□ -0.39
PPP4R1-218ENST00000580745 COL4A4P53420 1690 aaPredicted RBP12.61□□□□□ -0.39
PPP4R1-218ENST00000580745 MYO9BQ13459 2157 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 TDP2O95551 362 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 PSAPP07602 524 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 IL9P15248 144 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 GTF2F1P35269 517 aaKnown RBP eCLIP12.6□□□□□ -0.398e-7■■□□□ 14.3
PPP4R1-218ENST00000580745 CLCN3P51790 818 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 SSRP1Q08945 709 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 NPY5RQ15761 445 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 ZNF484Q5JVG2 852 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 NME8Q8N427 588 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 LRRC71Q8N4P6 559 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 METTL13Q8N6R0 699 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 CCDC148Q8NFR7 591 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 TBCKQ8TEA7 893 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 TNPO1Q92973 898 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 OSMRQ99650 979 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 UNC45AQ9H3U1 944 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 ALG13Q9NP73 1137 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 GJB4Q9NTQ9 266 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 PDRG1Q9NUG6 133 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 HCSTQ9UBK5 93 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 KCNJ14Q9UNX9 436 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 SAMM50Q9Y512 469 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 PCDHA10Q9Y5I2 948 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 SQORQ9Y6N5 450 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 KDM3AQ9Y4C1 1321 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 REV3LO60673 3130 aa12.6□□□□□ -0.39
PPP4R1-218ENST00000580745 TMEM150BA6NC51 233 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 GPR32O75388 356 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 RPS6KA5O75582 802 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 DNAJB1P25685 340 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 CAMK1Q14012 370 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 LEXMQ3ZCV2 418 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 TIGD5Q53EQ6 642 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 FAM228AQ86W67 206 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 NPAS4Q8IUM7 802 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 SMAP1Q8IYB5 467 aaPredicted RBP12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 BICD2Q8TD16 824 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 BBXQ8WY36 941 aaPredicted RBP12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 CLP1Q92989 425 aaKnown RBP12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 ZNF274Q96GC6 653 aaPredicted RBP12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 ADAM2Q99965 735 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 FTHL17Q9BXU8 183 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 NSUN3Q9H649 340 aaKnown RBP12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 DISC1Q9NRI5 854 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 TCEAL9Q9UHQ7 104 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 PCDHA4Q9UN74 947 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 ST3GAL5Q9UNP4 418 aa12.59□□□□□ -0.39
PPP4R1-218ENST00000580745 COL1A2P08123 1366 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 WDR64B1ANS9 1081 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 C5orf67F2Z3F1 127 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 M0R2N6 131 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 CPLX1O14810 134 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 RPLP2P05387 115 aaKnown RBP12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 RB1P06400 928 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 COL9A1P20849 921 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 DLX2Q07687 328 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 SCRN1Q12765 414 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 HYAL1Q12794 435 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 CLUL1Q15846 466 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 FAM102BQ5T8I3 360 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 MCTP2Q6DN12 878 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 PTCRAQ6ISU1 281 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 TRIM22Q8IYM9 498 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 BLIDQ8IZY5 108 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 NEK9Q8TD19 979 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 SLC5A5Q92911 643 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 SH2D3AQ9BRG2 576 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 C11orf84Q9BUA3 381 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 TM6SF1Q9BZW5 370 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 IGFLR1Q9H665 355 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 SH3GLB2Q9NR46 395 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 CLDND1Q9NY35 253 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 PCDHGC5Q9Y5F6 944 aa12.58□□□□□ -0.4
PPP4R1-218ENST00000580745 COL4A6Q14031 1691 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 LINC01565O15544 149 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 GAS7O60861 476 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 CSDE1O75534 798 aaKnown RBP12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 PSMD10O75832 226 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 DEXIO95424 95 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 OATP04181 439 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 ITGB1P05556 798 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 FGFR4P22455 802 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 IRS1P35568 1242 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 LTBRP36941 435 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 SARSP49591 514 aaKnown RBP12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 USP11P51784 963 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 CRYBB1P53674 252 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 NLRP11P59045 1033 aaKnown RBP12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 PRKCEQ02156 737 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 DRP2Q13474 957 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 LRCH2Q5VUJ6 765 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 EFCAB12Q6NXP0 572 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 CMTR2Q8IYT2 770 aaKnown RBP12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 LINC01465Q8N7H1 131 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 KLHL23Q8NBE8 558 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 SPPL3Q8TCT6 385 aa12.57□□□□□ -0.4
PPP4R1-218ENST00000580745 LRFN2Q9ULH4 789 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms