RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 NRCAMQ92823 1304 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 C17orf102A2RUQ5 167 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 HAS3O00219 553 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 RPLP2P05387 115 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PFKFB1P16118 471 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SYKP43405 635 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 MNX1P50219 401 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 GRB10Q13322 594 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 ITGA7Q13683 1181 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 UGCGQ16739 394 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TMEM119Q4V9L6 283 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 XKR9Q5GH70 373 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 POTEGQ6S5H5 508 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TRMT1LQ7Z2T5 733 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 RETREG2Q8NC44 543 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 LARP4BQ92615 738 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 KAT2BQ92831 832 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 CEP170P1Q96L14 293 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 MMTAG2Q9BU76 263 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 NIFKQ9BYG3 293 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SENP6Q9GZR1 1112 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 KCNH3Q9ULD8 1083 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 NOD1Q9Y239 953 aa12.57□□□□□ -0.4
CDK5RAP3-210ENST00000578733 FAM237AA0A1B0GTK4 181 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 A0A1B0GVL5 298 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TLR3O15455 904 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 MAGEB2O15479 319 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 POLR2DO15514 142 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 GAS2O43903 313 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 ZNF862O60290 1169 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 EYA4O95677 639 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SMIM10L2AP0DMW4 78 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SMIM10L2BP0DMW5 78 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PLCG1P19174 1290 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 RFC5P40937 340 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 POLGP54098 1239 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 AMPD3Q01432 767 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TBC1D8BQ0IIM8 1120 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 GRIK4Q16099 956 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 NBPF20Q3BBV1 942 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 MTERF2Q49AM1 385 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 KANK3Q6NY19 840 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 USP49Q70CQ1 688 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SV2BQ7L1I2 683 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 UBE2Q1Q7Z7E8 422 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SESTD1Q86VW0 696 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PDILTQ8N807 584 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SLC7A3Q8WY07 619 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 RAD54LQ92698 747 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PNMA5Q96PV4 448 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PLIN2Q99541 437 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 BHMT2Q9H2M3 363 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 RNPEPQ9H4A4 650 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 CYP26B1Q9NR63 512 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 BMP2KQ9NSY1 1161 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 KCND2Q9NZV8 630 aa12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 HOOK1Q9UJC3 728 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-210ENST00000578733 E9PMD0 336 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 ARVCFO00192 962 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 KINO60870 393 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 DGAT1O75907 488 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 MBD3O95983 291 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SSBP05455 408 aaKnown RBP eCLIP12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 KRT18P05783 430 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PLA2G4BP0C869 781 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 INSRRP14616 1297 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 ATP4AP20648 1035 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TMOD1P28289 359 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 DNM2P50570 870 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PSMC6P62333 389 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 IGBP1P78318 339 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 FAM160A1Q05DH4 1040 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 ECM1Q16610 540 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 ANO5Q75V66 913 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 CCDC155Q8N6L0 562 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PIGOQ8TEQ8 1089 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TCP11Q8WWU5 503 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 DHX58Q96C10 678 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PAWRQ96IZ0 340 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TIPINQ9BVW5 301 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TNMDQ9H2S6 317 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 GTF2IRD1Q9UHL9 959 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 HPSEQ9Y251 543 aa12.55□□□□□ -0.4
CDK5RAP3-210ENST00000578733 ALPK3Q96L96 1907 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 COL6A1P12109 1028 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 MCM4P33991 863 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 RARRES1P49788 294 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 NDUFA8P51970 172 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 C1orf53Q5VUE5 145 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PLA2G4FQ68DD2 849 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TAF2Q6P1X5 1199 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SLC39A5Q6ZMH5 540 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 RSPH3Q86UC2 560 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SYT2Q8N9I0 419 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 CNNM3Q8NE01 707 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 MCPH1Q8NEM0 835 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 LMBR1Q8WVP7 490 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 MTRQ99707 1265 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PANK2Q9BZ23 570 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms