RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 FAM167AQ96KS9 214 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 USP28Q96RU2 1077 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 CEP89Q96ST8 783 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 TCHHQ07283 1943 aa24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 NBNO60934 754 aa24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 SPATA31C1P0DKV0 1188 aa24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 ZSCAN22P10073 491 aaPredicted RBP24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 FXR2P51116 673 aaKnown RBP eCLIP24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 SHHQ15465 462 aa24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 TARBP2Q15633 366 aaKnown RBP24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 ECM1Q16610 540 aa24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 POTEGQ6S5H5 508 aa24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 TMEM199Q8N511 208 aa24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 CCDC155Q8N6L0 562 aa24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 HSD17B14Q9BPX1 270 aa24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 ZDHHC9Q9Y397 364 aa24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 MICAL3Q7RTP6 2002 aa24.33■■□□□ 1.49
CDC42EP4-203ENST00000578516 VWA3AA6NCI4 1184 aa24.32■■□□□ 1.48
CDC42EP4-203ENST00000578516 F13A1P00488 732 aa24.32■■□□□ 1.48
CDC42EP4-203ENST00000578516 DRP2Q13474 957 aa24.32■■□□□ 1.48
CDC42EP4-203ENST00000578516 BECN1Q14457 450 aa24.32■■□□□ 1.48
CDC42EP4-203ENST00000578516 PTPAQ15257 358 aa24.32■■□□□ 1.48
CDC42EP4-203ENST00000578516 XKR3Q5GH77 459 aa24.32■■□□□ 1.48
CDC42EP4-203ENST00000578516 ZNF668Q96K58 619 aaPredicted RBP24.32■■□□□ 1.48
CDC42EP4-203ENST00000578516 PCDHA2Q9Y5H9 948 aa24.32■■□□□ 1.48
CDC42EP4-203ENST00000578516 CHRNA1P02708 482 aa24.31■■□□□ 1.48
CDC42EP4-203ENST00000578516 PPIGQ13427 754 aaKnown RBP eCLIP24.31■■□□□ 1.48
CDC42EP4-203ENST00000578516 TMEM266Q2M3C6 531 aa24.31■■□□□ 1.48
CDC42EP4-203ENST00000578516 CATSPER3Q86XQ3 398 aa24.31■■□□□ 1.48
CDC42EP4-203ENST00000578516 PIGOQ8TEQ8 1089 aa24.31■■□□□ 1.48
CDC42EP4-203ENST00000578516 IL23AQ9NPF7 189 aa24.31■■□□□ 1.48
CDC42EP4-203ENST00000578516 NRBP2Q9NSY0 501 aa24.31■■□□□ 1.48
CDC42EP4-203ENST00000578516 DAXXQ9UER7 740 aaPredicted RBP24.31■■□□□ 1.48
CDC42EP4-203ENST00000578516 YWHABP31946 246 aaKnown RBP24.3■■□□□ 1.48
CDC42EP4-203ENST00000578516 MGAT3Q09327 533 aa24.3■■□□□ 1.48
CDC42EP4-203ENST00000578516 TMEM240Q5SV17 173 aa24.3■■□□□ 1.48
CDC42EP4-203ENST00000578516 ZNF365Q70YC5 407 aa24.3■■□□□ 1.48
CDC42EP4-203ENST00000578516 C4orf19Q8IY42 314 aa24.3■■□□□ 1.48
CDC42EP4-203ENST00000578516 METTL13Q8N6R0 699 aa24.3■■□□□ 1.48
CDC42EP4-203ENST00000578516 IGSF22Q8N9C0 903 aa24.3■■□□□ 1.48
CDC42EP4-203ENST00000578516 MMTAG2Q9BU76 263 aaKnown RBP24.3■■□□□ 1.48
CDC42EP4-203ENST00000578516 NIFKQ9BYG3 293 aaKnown RBP24.3■■□□□ 1.48
CDC42EP4-203ENST00000578516 ZSWIM4Q9H7M6 989 aa24.3■■□□□ 1.48
CDC42EP4-203ENST00000578516 TFIP11Q9UBB9 837 aaKnown RBP24.3■■□□□ 1.48
CDC42EP4-203ENST00000578516 LRWD1Q9UFC0 647 aa24.3■■□□□ 1.48
CDC42EP4-203ENST00000578516 CDY2AQ9Y6F7 541 aa24.3■■□□□ 1.48
CDC42EP4-203ENST00000578516 RSPH10B2B2RC85 870 aa24.29■■□□□ 1.48
CDC42EP4-203ENST00000578516 VTNP04004 478 aa24.29■■□□□ 1.48
CDC42EP4-203ENST00000578516 RSPH10BP0C881 870 aa24.29■■□□□ 1.48
CDC42EP4-203ENST00000578516 MARCKSP29966 332 aaPredicted RBP24.29■■□□□ 1.48
CDC42EP4-203ENST00000578516 BMP8BP34820 402 aa24.29■■□□□ 1.48
CDC42EP4-203ENST00000578516 PRPHP41219 470 aa24.29■■□□□ 1.48
CDC42EP4-203ENST00000578516 MKRN4PQ13434 485 aaPredicted RBP24.29■■□□□ 1.48
CDC42EP4-203ENST00000578516 TAF2Q6P1X5 1199 aa24.29■■□□□ 1.48
CDC42EP4-203ENST00000578516 DTHD1Q6ZMT9 781 aa24.29■■□□□ 1.48
CDC42EP4-203ENST00000578516 KIAA0319LQ8IZA0 1049 aa24.29■■□□□ 1.48
CDC42EP4-203ENST00000578516 LINC01465Q8N7H1 131 aa24.29■■□□□ 1.48
CDC42EP4-203ENST00000578516 SNX29Q8TEQ0 813 aa24.29■■□□□ 1.48
CDC42EP4-203ENST00000578516 SMIM35A0A1B0GVV1 85 aa24.28■■□□□ 1.48
CDC42EP4-203ENST00000578516 LAD1O00515 517 aa24.28■■□□□ 1.48
CDC42EP4-203ENST00000578516 CCT6AP40227 531 aaKnown RBP24.28■■□□□ 1.48
CDC42EP4-203ENST00000578516 MRPS6P82932 125 aaKnown RBP24.28■■□□□ 1.48
CDC42EP4-203ENST00000578516 XKR9Q5GH70 373 aa24.28■■□□□ 1.48
CDC42EP4-203ENST00000578516 EFCAB12Q6NXP0 572 aa24.28■■□□□ 1.48
CDC42EP4-203ENST00000578516 OTOP2Q7RTS6 562 aa24.28■■□□□ 1.48
CDC42EP4-203ENST00000578516 NEK9Q8TD19 979 aa24.28■■□□□ 1.48
CDC42EP4-203ENST00000578516 CEP170P1Q96L14 293 aa24.28■■□□□ 1.48
CDC42EP4-203ENST00000578516 ZSCAN16Q9H4T2 348 aaPredicted RBP24.28■■□□□ 1.48
CDC42EP4-203ENST00000578516 SUGCTQ9HAC7 445 aa24.28■■□□□ 1.48
CDC42EP4-203ENST00000578516 CDHR5Q9HBB8 845 aa24.28■■□□□ 1.48
CDC42EP4-203ENST00000578516 CYP26B1Q9NR63 512 aa24.28■■□□□ 1.48
CDC42EP4-203ENST00000578516 GHRP10912 638 aa24.27■■□□□ 1.48
CDC42EP4-203ENST00000578516 TBC1D8BQ0IIM8 1120 aa24.27■■□□□ 1.48
CDC42EP4-203ENST00000578516 PLIN2Q99541 437 aa24.27■■□□□ 1.48
CDC42EP4-203ENST00000578516 CXXC1Q9P0U4 656 aaPredicted RBP24.27■■□□□ 1.48
CDC42EP4-203ENST00000578516 CEP131Q9UPN4 1083 aa24.27■■□□□ 1.48
CDC42EP4-203ENST00000578516 GINS2Q9Y248 185 aa24.27■■□□□ 1.48
CDC42EP4-203ENST00000578516 RANBP2P49792 3224 aaKnown RBP24.27■■□□□ 1.48
CDC42EP4-203ENST00000578516 BRD1O95696 1058 aa24.26■■□□□ 1.47
CDC42EP4-203ENST00000578516 ZRSR1Q15695 479 aaKnown RBP24.26■■□□□ 1.47
CDC42EP4-203ENST00000578516 FAM26DQ5JW98 314 aa24.26■■□□□ 1.47
CDC42EP4-203ENST00000578516 SPECC1Q5M775 1068 aa24.26■■□□□ 1.47
CDC42EP4-203ENST00000578516 KCNK18Q7Z418 384 aa24.26■■□□□ 1.47
CDC42EP4-203ENST00000578516 TDHQ8IZJ6 230 aa24.26■■□□□ 1.47
CDC42EP4-203ENST00000578516 TNPO1Q92973 898 aaKnown RBP24.26■■□□□ 1.47
CDC42EP4-203ENST00000578516 CLIC6Q96NY7 704 aa24.26■■□□□ 1.47
CDC42EP4-203ENST00000578516 POLR3CQ9BUI4 534 aaPredicted RBP24.26■■□□□ 1.47
CDC42EP4-203ENST00000578516 TUFT1Q9NNX1 390 aa24.26■■□□□ 1.47
CDC42EP4-203ENST00000578516 FBXO2Q9UK22 296 aaPredicted RBP24.26■■□□□ 1.47
CDC42EP4-203ENST00000578516 LYPLA2O95372 231 aa24.25■■□□□ 1.47
CDC42EP4-203ENST00000578516 RPA1P27694 616 aa24.25■■□□□ 1.47
CDC42EP4-203ENST00000578516 KIZQ2M2Z5 673 aa24.25■■□□□ 1.47
CDC42EP4-203ENST00000578516 FAM109BQ6ICB4 259 aaPredicted RBP24.25■■□□□ 1.47
CDC42EP4-203ENST00000578516 RPAINQ86UA6 219 aa24.25■■□□□ 1.47
CDC42EP4-203ENST00000578516 ERMNQ8TAM6 284 aa24.25■■□□□ 1.47
CDC42EP4-203ENST00000578516 LRRC15Q8TF66 581 aa24.25■■□□□ 1.47
CDC42EP4-203ENST00000578516 TMEM40Q8WWA1 233 aa24.25■■□□□ 1.47
CDC42EP4-203ENST00000578516 RNPC3Q96LT9 517 aaKnown RBP24.25■■□□□ 1.47
CDC42EP4-203ENST00000578516 PNMA5Q96PV4 448 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms