RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 ZSWIM8A7E2V4 1837 aa14.92□□□□□ -0.02
SRSF1-202ENST00000578430 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.91□□□□□ -0.02
SRSF1-202ENST00000578430 FRMD3A2A2Y4 597 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 GOLGA6L3A6NEY3 463 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 ADCY3O60266 1144 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 STBD1O95210 358 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 HMGCRP04035 888 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 OATP04181 439 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 CYBAP13498 195 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 GAP43P17677 238 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 GIT2Q14161 759 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 KMT5BQ4FZB7 885 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 ANO6Q4KMQ2 910 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 COBLL1Q53SF7 1204 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 XKR9Q5GH70 373 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 PRAMEF19Q5SWL8 479 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 PADI6Q6TGC4 694 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 DYMQ7RTS9 669 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 GAS2L3Q86XJ1 694 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 EXOC8Q8IYI6 725 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 FAM200AQ8TCP9 573 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 RAET1EQ8TD07 263 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 GLG1Q92896 1179 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 PCYT2Q99447 389 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 BPIFA3Q9BQP9 254 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 NIFKQ9BYG3 293 aaKnown RBP14.91□□□□□ -0.02
SRSF1-202ENST00000578430 AP5M1Q9H0R1 490 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 PANK4Q9NVE7 773 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 SEL1LQ9UBV2 794 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 TELO2Q9Y4R8 837 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 COL4A3BPQ9Y5P4 624 aa14.91□□□□□ -0.02
SRSF1-202ENST00000578430 MYH9P35579 1960 aaKnown RBP14.91□□□□□ -0.02
SRSF1-202ENST00000578430 FSD2A1L4K1 749 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 A6NJR5 290 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 DUSP11O75319 330 aaKnown RBP14.9□□□□□ -0.02
SRSF1-202ENST00000578430 TBCAO75347 108 aaKnown RBP14.9□□□□□ -0.02
SRSF1-202ENST00000578430 IDEP14735 1019 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 ZNF165P49910 485 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 CPT1AP50416 773 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 CAP1Q01518 475 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 EHHADHQ08426 723 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 STIM1Q13586 685 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 DGKDQ16760 1214 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 DPCR1Q3MIW9 517 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 ANO5Q75V66 913 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 SLAIN1Q8ND83 568 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 AFG1LQ8WV93 481 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 BBXQ8WY36 941 aaPredicted RBP14.9□□□□□ -0.02
SRSF1-202ENST00000578430 CEP170P1Q96L14 293 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 RUSC1Q9BVN2 902 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 DNAJC25Q9H1X3 360 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 ERAP1Q9NZ08 941 aa14.9□□□□□ -0.02
SRSF1-202ENST00000578430 A0A087WWV3 80 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 ZBTB39O15060 712 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 SEPT4O43236 478 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 DYNC1LI2O43237 492 aaPredicted RBP14.89□□□□□ -0.03
SRSF1-202ENST00000578430 DGAT1O75907 488 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 MMP3P08254 477 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 ATP4AP20648 1035 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 BMP6P22004 513 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 ERCC5P28715 1186 aaPredicted RBP14.89□□□□□ -0.03
SRSF1-202ENST00000578430 RFC5P40937 340 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 ZNF131P52739 623 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 NKX3-2P78367 333 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 TMEM63BQ5T3F8 832 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 GJC2Q5T442 439 aaPredicted RBP14.89□□□□□ -0.03
SRSF1-202ENST00000578430 UTP14CQ5TAP6 766 aaKnown RBP14.89□□□□□ -0.03
SRSF1-202ENST00000578430 CTU1Q7Z7A3 348 aaKnown RBP14.89□□□□□ -0.03
SRSF1-202ENST00000578430 TLK2Q86UE8 772 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 MCPH1Q8NEM0 835 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 ATP8B4Q8TF62 1192 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 REEP2Q9BRK0 252 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 CYP26B1Q9NR63 512 aa14.89□□□□□ -0.03
SRSF1-202ENST00000578430 SEPT9Q9UHD8 586 aaPredicted RBP14.89□□□□□ -0.03
SRSF1-202ENST00000578430 ZNF215Q9UL58 517 aaPredicted RBP14.89□□□□□ -0.03
SRSF1-202ENST00000578430 GAS2O43903 313 aaKnown RBP14.88□□□□□ -0.03
SRSF1-202ENST00000578430 HBP1O60381 514 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 KPNA6O60684 536 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 FAM13AO94988 1023 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 KIF20AO95235 890 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 LGALS2P05162 132 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 CACNB2Q08289 660 aaPredicted RBP14.88□□□□□ -0.03
SRSF1-202ENST00000578430 COASYQ13057 564 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 TARBP2Q15633 366 aaKnown RBP14.88□□□□□ -0.03
SRSF1-202ENST00000578430 HERC4Q5GLZ8 1057 aaPredicted RBP14.88□□□□□ -0.03
SRSF1-202ENST00000578430 FAM26FQ5R3K3 315 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 MAP3K21Q5TCX8 1036 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 ISM2Q6H9L7 571 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 TRPV1Q8NER1 839 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 DRC1Q96MC2 740 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 JPH2Q9BR39 696 aaPredicted RBP14.88□□□□□ -0.03
SRSF1-202ENST00000578430 C17orf75Q9HAS0 396 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 PARVGQ9HBI0 331 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 SPC25Q9HBM1 224 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 OLFML3Q9NRN5 406 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 KCNG1Q9UIX4 513 aa14.88□□□□□ -0.03
SRSF1-202ENST00000578430 NPHP3-ACAD11A0A0J9YXS1 232 aa14.87□□□□□ -0.03
SRSF1-202ENST00000578430 SMTNL1A8MU46 457 aa14.87□□□□□ -0.03
SRSF1-202ENST00000578430 IKBKBO14920 756 aa14.87□□□□□ -0.03
SRSF1-202ENST00000578430 ADCY6O43306 1168 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms