RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 TBC1D8O95759 1140 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 H2AFZP0C0S5 128 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 EZRP15311 586 aaKnown RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 ATP2A2P16615 1042 aaKnown RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 KCNH2Q12809 1159 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 PDIA5Q14554 519 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 TTLL4Q14679 1199 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 EPHA7Q15375 998 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 EARS2Q5JPH6 523 aaKnown RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 C9orf131Q5VYM1 1079 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 H2AFVQ71UI9 128 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 RFX6Q8HWS3 928 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 PASD1Q8IV76 773 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 CCDC89Q8N998 374 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 GMCL1P1Q8NEA9 526 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 KIAA1524Q8TCG1 905 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 RPS6KC1Q96S38 1066 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 IQCGQ9H095 443 aaKnown RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 SNX25Q9H3E2 840 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 JPH1Q9HDC5 661 aaPredicted RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 CEP72Q9P209 647 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 SCN11AQ9UI33 1791 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 SRGAP2O75044 1071 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 MAPK4P31152 587 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 GPC3P51654 580 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 CXCL9Q07325 125 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 PTPAQ15257 358 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 LLGL1Q15334 1064 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 CEP55Q53EZ4 464 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 ZC2HC1CQ53FD0 456 aaPredicted RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 NBPF12Q5TAG4 269 aaPredicted RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 ILDR1Q86SU0 546 aaPredicted RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 GPR161Q8N6U8 529 aaKnown RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 AFAP1L1Q8TED9 768 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 SLC16A10Q8TF71 515 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 ATRIPQ8WXE1 791 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 RSAD2Q8WXG1 361 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 LPAR1Q92633 364 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 TMEM143Q96AN5 459 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 JPH2Q9BR39 696 aaPredicted RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 MXRA8Q9BRK3 442 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 GOLGA8SH3BPF8 625 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 CAPN2P17655 700 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 OAS2P29728 719 aaKnown RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 MXI1P50539 228 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 VAMP7P51809 220 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 ETF1P62495 437 aaKnown RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 COL9A3Q14050 684 aaPredicted RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 NTRK3Q16288 839 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 SPDYE2Q495Y8 402 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 LMBRD2Q68DH5 695 aaPredicted RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 APOBEC3HQ6NTF7 200 aaKnown RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 RSPH3Q86UC2 560 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 NACA2Q9H009 215 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 TYW1Q9NV66 732 aaKnown RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 ALS2Q96Q42 1657 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 IQCA1LA6NCM1 817 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 ZNF233A6NK53 670 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 EFCAB8A8MWE9 144 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 MSH4O15457 936 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 SLURP2P0DP57 97 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 ZSCAN20P17040 1043 aaPredicted RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 HDLBPQ00341 1268 aaKnown RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 SNAPC2Q13487 334 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 NEDD9Q14511 834 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 PPP2R5DQ14738 602 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 DACT2Q5SW24 774 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 CATSPER3Q86XQ3 398 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 OR6J1Q8NGC5 347 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 SPEF2Q9C093 1822 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 PLSCR1O15162 318 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 CELF2O95319 508 aaKnown RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 SMARCA1P28370 1054 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 ADCY8P40145 1251 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 PPM1FP49593 454 aaPredicted RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 ZNF157P51786 506 aaPredicted RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 ARPP19P56211 112 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 MRPS25P82663 173 aaKnown RBP5.04□□□□□ -1.6
NF1-218ENST00000577967 PAK2Q13177 524 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 GRB10Q13322 594 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 NAALADL2Q58DX5 795 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 SLC51AQ86UW1 340 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 CERS5Q8N5B7 392 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 AP1M1Q9BXS5 423 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 TTLL3Q9Y4R7 772 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 FAM169AQ9Y6X4 670 aa5.04□□□□□ -1.6
NF1-218ENST00000577967 GOLGA6BA6NDN3 693 aa5.03□□□□□ -1.6
NF1-218ENST00000577967 PPP1R3GB7ZBB8 358 aa5.03□□□□□ -1.6
NF1-218ENST00000577967 CAPN9O14815 690 aa5.03□□□□□ -1.6
NF1-218ENST00000577967 NCK2O43639 380 aa5.03□□□□□ -1.6
NF1-218ENST00000577967 PALMO75781 387 aa5.03□□□□□ -1.6
NF1-218ENST00000577967 STK10O94804 968 aaKnown RBP5.03□□□□□ -1.6
NF1-218ENST00000577967 ICAM1P05362 532 aa5.03□□□□□ -1.6
NF1-218ENST00000577967 TRIM49P0CI25 452 aa5.03□□□□□ -1.6
NF1-218ENST00000577967 TRIM49CP0CI26 452 aa5.03□□□□□ -1.6
NF1-218ENST00000577967 VPS41P49754 854 aa5.03□□□□□ -1.6
NF1-218ENST00000577967 FXR2P51116 673 aaKnown RBP eCLIP5.03□□□□□ -1.61e-6■□□□□ 10.9
NF1-218ENST00000577967 MRPS9P82933 396 aaKnown RBP5.03□□□□□ -1.6
NF1-218ENST00000577967 SF3A3Q12874 501 aaKnown RBP eCLIP5.03□□□□□ -1.6
NF1-218ENST00000577967 DGKZQ13574 1117 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms