RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 MICAL3Q7RTP6 2002 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 IGSF9BQ9UPX0 1349 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 ENPP3O14638 875 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 MAGEB2O15479 319 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 CCNT1O60563 726 aaKnown RBP17.48■□□□□ 0.39
SF3B3-215ENST00000577085 DTNBO60941 627 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 CTDNEP1O95476 244 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 SEC24BO95487 1268 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 GCFC2P16383 781 aaKnown RBP17.48■□□□□ 0.39
SF3B3-215ENST00000577085 ATP4AP20648 1035 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 KRT2P35908 639 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 PRKCEQ02156 737 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 NFX1Q12986 1120 aaKnown RBP17.48■□□□□ 0.39
SF3B3-215ENST00000577085 NPY5RQ15761 445 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 FBXO22Q8NEZ5 403 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 SAMD11Q96NU1 681 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 MAP7D2Q96T17 732 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 AGO3Q9H9G7 860 aaKnown RBP17.48■□□□□ 0.39
SF3B3-215ENST00000577085 PADI3Q9ULW8 664 aa17.48■□□□□ 0.39
SF3B3-215ENST00000577085 CHD7Q9P2D1 2997 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 PRUNE2Q8WUY3 3088 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 RPS6KA5O75582 802 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 PSMD10O75832 226 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 C22orf31O95567 290 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 POU3F3P20264 500 aaPredicted RBP17.47■□□□□ 0.39
SF3B3-215ENST00000577085 SPRED2Q7Z698 418 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 KIAA0319LQ8IZA0 1049 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 FIBCD1Q8N539 461 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 ATXN2LQ8WWM7 1075 aaKnown RBP17.47■□□□□ 0.39
SF3B3-215ENST00000577085 SCLT1Q96NL6 688 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 PPP1R16BQ96T49 567 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 C17orf80Q9BSJ5 609 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 SUGCTQ9HAC7 445 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 PRDM6Q9NQX0 595 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 GJB4Q9NTQ9 266 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 SEPT9Q9UHD8 586 aaPredicted RBP17.47■□□□□ 0.39
SF3B3-215ENST00000577085 LRFN2Q9ULH4 789 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 AKT3Q9Y243 479 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 KDM3AQ9Y4C1 1321 aa17.47■□□□□ 0.39
SF3B3-215ENST00000577085 DENND3A2RUS2 1198 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 ZBTB42B2RXF5 422 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 EDIL3O43854 480 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 LARGE1O95461 756 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 STAG3L1P0CL83 205 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 IBSPP21815 317 aaPredicted RBP17.46■□□□□ 0.39
SF3B3-215ENST00000577085 TBC1D8BQ0IIM8 1120 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 KIZQ2M2Z5 673 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 TMEM266Q2M3C6 531 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 TJAP1Q5JTD0 557 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 KRT40Q6A162 431 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 PPP4R3AQ6IN85 833 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 EFCAB12Q6NXP0 572 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 ETNPPLQ8TBG4 499 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 SP7Q8TDD2 431 aaPredicted RBP17.46■□□□□ 0.39
SF3B3-215ENST00000577085 OXER1Q8TDS5 423 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 FAM20AQ96MK3 541 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 COL25A1Q9BXS0 654 aaPredicted RBP17.46■□□□□ 0.39
SF3B3-215ENST00000577085 RNF216Q9NWF9 866 aaPredicted RBP17.46■□□□□ 0.39
SF3B3-215ENST00000577085 LMCD1Q9NZU5 365 aa17.46■□□□□ 0.39
SF3B3-215ENST00000577085 A0A0C4DFX4 3053 aa17.46■□□□□ 0.38
SF3B3-215ENST00000577085 GPR182O15218 404 aa17.45■□□□□ 0.38
SF3B3-215ENST00000577085 SLC37A4O43826 429 aa17.45■□□□□ 0.38
SF3B3-215ENST00000577085 BAG4O95429 457 aaKnown RBP17.45■□□□□ 0.38
SF3B3-215ENST00000577085 VTNP04004 478 aa17.45■□□□□ 0.38
SF3B3-215ENST00000577085 CLCN3P51790 818 aa17.45■□□□□ 0.38
SF3B3-215ENST00000577085 FOSBP53539 338 aa17.45■□□□□ 0.38
SF3B3-215ENST00000577085 CRYBB1P53674 252 aaPredicted RBP17.45■□□□□ 0.38
SF3B3-215ENST00000577085 MRPS5P82675 430 aaKnown RBP17.45■□□□□ 0.38
SF3B3-215ENST00000577085 BTG3Q14201 252 aaPredicted RBP17.45■□□□□ 0.38
SF3B3-215ENST00000577085 PTPROQ16827 1216 aa17.45■□□□□ 0.38
SF3B3-215ENST00000577085 AAK1Q2M2I8 961 aa17.45■□□□□ 0.38
SF3B3-215ENST00000577085 EPC2Q52LR7 807 aa17.45■□□□□ 0.38
SF3B3-215ENST00000577085 FAM43BQ6ZT52 329 aaPredicted RBP17.45■□□□□ 0.38
SF3B3-215ENST00000577085 ZNF710Q8N1W2 664 aa17.45■□□□□ 0.38
SF3B3-215ENST00000577085 NSUN7Q8NE18 718 aaKnown RBP17.45■□□□□ 0.38
SF3B3-215ENST00000577085 MBOAT7Q96N66 472 aa17.45■□□□□ 0.38
SF3B3-215ENST00000577085 OSMRQ99650 979 aa17.45■□□□□ 0.38
SF3B3-215ENST00000577085 LIMCH1Q9UPQ0 1083 aa17.45■□□□□ 0.38
SF3B3-215ENST00000577085 RWDD3Q9Y3V2 267 aa17.45■□□□□ 0.38
SF3B3-215ENST00000577085 ADGRA3Q8IWK6 1321 aa17.45■□□□□ 0.38
SF3B3-215ENST00000577085 ZNF862O60290 1169 aa17.44■□□□□ 0.38
SF3B3-215ENST00000577085 DKC1O60832 514 aaKnown RBP eCLIP17.44■□□□□ 0.38
SF3B3-215ENST00000577085 FDPSP14324 419 aaKnown RBP17.44■□□□□ 0.38
SF3B3-215ENST00000577085 SAFBQ15424 915 aaKnown RBP eCLIP17.44■□□□□ 0.38
SF3B3-215ENST00000577085 UGCGQ16739 394 aa17.44■□□□□ 0.38
SF3B3-215ENST00000577085 XKR3Q5GH77 459 aa17.44■□□□□ 0.38
SF3B3-215ENST00000577085 TMEM192Q8IY95 271 aa17.44■□□□□ 0.38
SF3B3-215ENST00000577085 LRRC71Q8N4P6 559 aa17.44■□□□□ 0.38
SF3B3-215ENST00000577085 SIP14410 1827 aa17.44■□□□□ 0.38
SF3B3-215ENST00000577085 MYH9P35579 1960 aaKnown RBP17.44■□□□□ 0.38
SF3B3-215ENST00000577085 DDX11L8A8MPP1 907 aa17.43■□□□□ 0.38
SF3B3-215ENST00000577085 JAK2O60674 1132 aa17.43■□□□□ 0.38
SF3B3-215ENST00000577085 LPXNO60711 386 aa17.43■□□□□ 0.38
SF3B3-215ENST00000577085 CTNNB1P35222 781 aa17.43■□□□□ 0.38
SF3B3-215ENST00000577085 DNM2P50570 870 aa17.43■□□□□ 0.38
SF3B3-215ENST00000577085 NLRP11P59045 1033 aaKnown RBP17.43■□□□□ 0.38
SF3B3-215ENST00000577085 PSMC5P62195 406 aa17.43■□□□□ 0.38
SF3B3-215ENST00000577085 NR5A1Q13285 461 aa17.43■□□□□ 0.38
SF3B3-215ENST00000577085 MTERF2Q49AM1 385 aa17.43■□□□□ 0.38
SF3B3-215ENST00000577085 NPAS4Q8IUM7 802 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms