RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 PPP1R13LQ8WUF5 828 aa9.53□□□□□ -0.88
PRPF8-213ENST00000576407 VTI1AQ96AJ9 217 aa9.53□□□□□ -0.88
PRPF8-213ENST00000576407 DHX58Q96C10 678 aa9.53□□□□□ -0.88
PRPF8-213ENST00000576407 GLT1D1Q96MS3 346 aa9.53□□□□□ -0.88
PRPF8-213ENST00000576407 SH2D3AQ9BRG2 576 aa9.53□□□□□ -0.88
PRPF8-213ENST00000576407 NIFKQ9BYG3 293 aaKnown RBP9.53□□□□□ -0.88
PRPF8-213ENST00000576407 BHMT2Q9H2M3 363 aa9.53□□□□□ -0.88
PRPF8-213ENST00000576407 ANKEF1Q9NU02 776 aa9.53□□□□□ -0.88
PRPF8-213ENST00000576407 BLOC1S4Q9NUP1 217 aa9.53□□□□□ -0.88
PRPF8-213ENST00000576407 SEPT9Q9UHD8 586 aaPredicted RBP9.53□□□□□ -0.88
PRPF8-213ENST00000576407 TRPC6Q9Y210 931 aa9.53□□□□□ -0.88
PRPF8-213ENST00000576407 MYH9P35579 1960 aaKnown RBP9.53□□□□□ -0.88
PRPF8-213ENST00000576407 ZBTB42B2RXF5 422 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 HBP1O60381 514 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 NR1I2O75469 434 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 ZNF202O95125 648 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 EYA4O95677 639 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 SMIM10L2AP0DMW4 78 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 SMIM10L2BP0DMW5 78 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 INSRRP14616 1297 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 CAPN2P17655 700 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 PTMSP20962 102 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 RARRES1P49788 294 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 NPEPPSP55786 919 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 ITGA7Q13683 1181 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 TARBP2Q15633 366 aaKnown RBP9.52□□□□□ -0.89
PRPF8-213ENST00000576407 NBPF20Q3BBV1 942 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 LONRF3Q496Y0 759 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 MTERF2Q49AM1 385 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 XKR9Q5GH70 373 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 FMR1NBQ8N0W7 255 aaPredicted RBP9.52□□□□□ -0.89
PRPF8-213ENST00000576407 C7orf31Q8N865 590 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 ANKLE1Q8NAG6 615 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 LARP4BQ92615 738 aaKnown RBP9.52□□□□□ -0.89
PRPF8-213ENST00000576407 RAD54LQ92698 747 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 CEP170P1Q96L14 293 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 PYM1Q9BRP8 204 aaKnown RBP9.52□□□□□ -0.89
PRPF8-213ENST00000576407 STARD7Q9NQZ5 370 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 CYP26B1Q9NR63 512 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 STK17AQ9UEE5 414 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 DBR1Q9UK59 544 aaKnown RBP9.52□□□□□ -0.89
PRPF8-213ENST00000576407 GRIN2DO15399 1336 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 SCN10AQ9Y5Y9 1956 aa9.52□□□□□ -0.89
PRPF8-213ENST00000576407 ARHGEF35A5YM69 484 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 ACTN4O43707 911 aaKnown RBP9.51□□□□□ -0.89
PRPF8-213ENST00000576407 SSBP05455 408 aaKnown RBP eCLIP9.51□□□□□ -0.89
PRPF8-213ENST00000576407 SLFN14P0C7P3 912 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 PLA2G4BP0C869 781 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 COL6A1P12109 1028 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 EN2P19622 333 aaPredicted RBP9.51□□□□□ -0.89
PRPF8-213ENST00000576407 SLC12A3P55017 1021 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 IGBP1P78318 339 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 MLLT1Q03111 559 aaPredicted RBP9.51□□□□□ -0.89
PRPF8-213ENST00000576407 PPFIA1Q13136 1202 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 DHX8Q14562 1220 aaKnown RBP9.51□□□□□ -0.89
PRPF8-213ENST00000576407 MCM6Q14566 821 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 GRIK4Q16099 956 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 ZNF484Q5JVG2 852 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 NFRKBQ6P4R8 1299 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 KRBA2Q6ZNG9 492 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 CEP57L1Q8IYX8 460 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 SYT2Q8N9I0 419 aaPredicted RBP9.51□□□□□ -0.89
PRPF8-213ENST00000576407 DIS3LQ8TF46 1054 aaKnown RBP9.51□□□□□ -0.89
PRPF8-213ENST00000576407 TRAPPC12Q8WVT3 735 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 CCDC43Q96MW1 224 aaKnown RBP9.51□□□□□ -0.89
PRPF8-213ENST00000576407 CEP89Q96ST8 783 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 SENP6Q9GZR1 1112 aaPredicted RBP9.51□□□□□ -0.89
PRPF8-213ENST00000576407 CUEDC2Q9H467 287 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 SETD4Q9NVD3 440 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 HDAC6Q9UBN7 1215 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 USP25Q9UHP3 1055 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 SERTAD1Q9UHV2 236 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 ARID2Q68CP9 1835 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 NRCAMQ92823 1304 aa9.51□□□□□ -0.89
PRPF8-213ENST00000576407 COL1A2P08123 1366 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 A0A0U1RQG5 324 aaPredicted RBP9.5□□□□□ -0.89
PRPF8-213ENST00000576407 C17orf102A2RUQ5 167 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 RRN3P2A6NIE6 340 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 MAFO75444 373 aaPredicted RBP9.5□□□□□ -0.89
PRPF8-213ENST00000576407 HOXC8P31273 242 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 RFC5P40937 340 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 TBC1D8BQ0IIM8 1120 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 HIC1Q14526 733 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 FAM47CQ5HY64 1035 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 MARCH8Q5T0T0 291 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 PADI6Q6TGC4 694 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 SV2BQ7L1I2 683 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 SESTD1Q86VW0 696 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 GPBP1Q86WP2 473 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 GRAMD1CQ8IYS0 662 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 SLC43A3Q8NBI5 491 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 CNNM3Q8NE01 707 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 GPT2Q8TD30 523 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 LMBR1Q8WVP7 490 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 STAMQ92783 540 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 ZBTB10Q96DT7 871 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 PAGE5Q96GU1 130 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 PAWRQ96IZ0 340 aaKnown RBP9.5□□□□□ -0.89
PRPF8-213ENST00000576407 TIGD1Q96MW7 591 aa9.5□□□□□ -0.89
PRPF8-213ENST00000576407 MTRQ99707 1265 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms