RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 TARBP2Q15633 366 aaKnown RBP19.07■□□□□ 0.64
NUP88-210ENST00000574867 MRPS27Q92552 414 aaKnown RBP19.07■□□□□ 0.64
NUP88-210ENST00000574867 CEP170P1Q96L14 293 aa19.07■□□□□ 0.64
NUP88-210ENST00000574867 CYP26B1Q9NR63 512 aa19.07■□□□□ 0.64
NUP88-210ENST00000574867 SETD4Q9NVD3 440 aa19.07■□□□□ 0.64
NUP88-210ENST00000574867 ZBTB42B2RXF5 422 aa19.06■□□□□ 0.64
NUP88-210ENST00000574867 EYA4O95677 639 aa19.06■□□□□ 0.64
NUP88-210ENST00000574867 RARRES1P49788 294 aa19.06■□□□□ 0.64
NUP88-210ENST00000574867 MTERF2Q49AM1 385 aa19.06■□□□□ 0.64
NUP88-210ENST00000574867 RRAGBQ5VZM2 374 aa19.06■□□□□ 0.64
NUP88-210ENST00000574867 PLA2G4FQ68DD2 849 aa19.06■□□□□ 0.64
NUP88-210ENST00000574867 ANKRD33Q7Z3H0 272 aa19.06■□□□□ 0.64
NUP88-210ENST00000574867 EXOC8Q8IYI6 725 aa19.06■□□□□ 0.64
NUP88-210ENST00000574867 TUBE1Q9UJT0 475 aa19.06■□□□□ 0.64
NUP88-210ENST00000574867 FAM237AA0A1B0GTK4 181 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 MBLAC1A4D2B0 266 aaPredicted RBP19.05■□□□□ 0.64
NUP88-210ENST00000574867 TMEM150BA6NC51 233 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 GOLGA6L22H0YM25 854 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 ADAM17P78536 824 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 XKR9Q5GH70 373 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 ARHGEF35A5YM69 484 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 ZBTB39O15060 712 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 TLR3O15455 904 aaKnown RBP19.05■□□□□ 0.64
NUP88-210ENST00000574867 PFKFB1P16118 471 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 RFC5P40937 340 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 STAT6P42226 847 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 IGBP1P78318 339 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 TBC1D8BQ0IIM8 1120 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 GDF6Q6KF10 455 aaPredicted RBP19.05■□□□□ 0.64
NUP88-210ENST00000574867 FAM126BQ8IXS8 530 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 FSIP1Q8NA03 581 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 PPP1R13LQ8WUF5 828 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 TOX2Q96NM4 488 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 PLIN2Q99541 437 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 JPH2Q9BR39 696 aaPredicted RBP19.05■□□□□ 0.64
NUP88-210ENST00000574867 CUEDC2Q9H467 287 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 KCNH3Q9ULD8 1083 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 HPSEQ9Y251 543 aa19.05■□□□□ 0.64
NUP88-210ENST00000574867 E9PMD0 336 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 MAGEB2O15479 319 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 NPEPPSP55786 919 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 TRIM60Q495X7 471 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 MARCH8Q5T0T0 291 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 KCNK18Q7Z418 384 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 IQUBQ8NA54 791 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 SLC7A3Q8WY07 619 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 CEP89Q96ST8 783 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 BHMT2Q9H2M3 363 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 NOD1Q9Y239 953 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 A0A087X0B3 334 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 A0A1B0GVL5 298 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 C22orf31O95567 290 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 RTP1P59025 263 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 PTGISQ16647 500 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 LRRC26Q2I0M4 334 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 MTHFD1LQ6UB35 978 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 PDILTQ8N807 584 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 RETREG2Q8NC44 543 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 TRAPPC12Q8WVT3 735 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 LARP4BQ92615 738 aaKnown RBP19.04■□□□□ 0.64
NUP88-210ENST00000574867 RAD54LQ92698 747 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 HTATIP2Q9BUP3 242 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 BLOC1S4Q9NUP1 217 aa19.04■□□□□ 0.64
NUP88-210ENST00000574867 DCDC2CA8MYV0 355 aa19.03■□□□□ 0.64
NUP88-210ENST00000574867 GAS2O43903 313 aaKnown RBP19.03■□□□□ 0.64
NUP88-210ENST00000574867 B4GALT4O60513 344 aa19.03■□□□□ 0.64
NUP88-210ENST00000574867 PQBP1O60828 265 aaKnown RBP19.03■□□□□ 0.64
NUP88-210ENST00000574867 DGAT1O75907 488 aa19.03■□□□□ 0.64
NUP88-210ENST00000574867 RPLP2P05387 115 aaKnown RBP19.03■□□□□ 0.64
NUP88-210ENST00000574867 UBE2HP62256 183 aa19.03■□□□□ 0.64
NUP88-210ENST00000574867 HIC1Q14526 733 aa19.03■□□□□ 0.64
NUP88-210ENST00000574867 TAF2Q6P1X5 1199 aa19.03■□□□□ 0.64
NUP88-210ENST00000574867 TRMT13Q9NUP7 481 aaKnown RBP19.03■□□□□ 0.64
NUP88-210ENST00000574867 A0A087WWV3 80 aa19.02■□□□□ 0.64
NUP88-210ENST00000574867 MAFO75444 373 aaPredicted RBP19.02■□□□□ 0.64
NUP88-210ENST00000574867 KLRC1P26715 233 aa19.02■□□□□ 0.64
NUP88-210ENST00000574867 POLGP54098 1239 aaPredicted RBP19.02■□□□□ 0.64
NUP88-210ENST00000574867 E2F4Q16254 413 aa19.02■□□□□ 0.64
NUP88-210ENST00000574867 NAALADL2Q58DX5 795 aa19.02■□□□□ 0.64
NUP88-210ENST00000574867 SERINC5Q86VE9 423 aa19.02■□□□□ 0.64
NUP88-210ENST00000574867 SYT2Q8N9I0 419 aaPredicted RBP19.02■□□□□ 0.64
NUP88-210ENST00000574867 SH2D3AQ9BRG2 576 aa19.02■□□□□ 0.64
NUP88-210ENST00000574867 DHX33Q9H6R0 707 aaKnown RBP19.02■□□□□ 0.64
NUP88-210ENST00000574867 MAGEF1Q9HAY2 307 aa19.02■□□□□ 0.64
NUP88-210ENST00000574867 KCND2Q9NZV8 630 aa19.02■□□□□ 0.64
NUP88-210ENST00000574867 USP25Q9UHP3 1055 aa19.02■□□□□ 0.64
NUP88-210ENST00000574867 ATP11BQ9Y2G3 1177 aa19.02■□□□□ 0.64
NUP88-210ENST00000574867 PCDHA2Q9Y5H9 948 aa19.02■□□□□ 0.64
NUP88-210ENST00000574867 POLR2DO15514 142 aaKnown RBP19.02■□□□□ 0.63
NUP88-210ENST00000574867 TREHO43280 583 aa19.02■□□□□ 0.63
NUP88-210ENST00000574867 CD4P01730 458 aa19.02■□□□□ 0.63
NUP88-210ENST00000574867 PLA2G4BP0C869 781 aa19.02■□□□□ 0.63
NUP88-210ENST00000574867 SYKP43405 635 aa19.02■□□□□ 0.63
NUP88-210ENST00000574867 PTK7Q13308 1070 aa19.02■□□□□ 0.63
NUP88-210ENST00000574867 PANK2Q9BZ23 570 aa19.02■□□□□ 0.63
NUP88-210ENST00000574867 GOLPH3LQ9H4A5 285 aa19.02■□□□□ 0.63
NUP88-210ENST00000574867 ATP6V0A4Q9HBG4 840 aa19.02■□□□□ 0.63
NUP88-210ENST00000574867 TRIP12Q14669 1992 aaPredicted RBP19.02■□□□□ 0.63
NUP88-210ENST00000574867 ALPK3Q96L96 1907 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 PRPF40AO75400 957 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms