RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 PTPRAP18433 802 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 FECHP22830 423 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 INHBEP58166 350 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 PPP2R5CQ13362 524 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 RINT1Q6NUQ1 792 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 DNAJC7Q99615 494 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 TEKT3Q9BXF9 490 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 IKZF4Q9H2S9 585 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 KCTD10Q9H3F6 313 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 KCNH7Q9NS40 1196 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 RIPK3Q9Y572 518 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 SBF1O95248 1867 aa17.53■□□□□ 0.4
USP43-204ENST00000573955 SLC26A4O43511 780 aa17.53■□□□□ 0.4
USP43-204ENST00000573955 BACE1P56817 501 aa17.53■□□□□ 0.4
USP43-204ENST00000573955 KCNA1Q09470 495 aa17.53■□□□□ 0.4
USP43-204ENST00000573955 SYTL5Q8TDW5 730 aaPredicted RBP17.53■□□□□ 0.4
USP43-204ENST00000573955 ADM5C9JUS6 153 aa17.53■□□□□ 0.4
USP43-204ENST00000573955 GCNT3O95395 438 aa17.53■□□□□ 0.4
USP43-204ENST00000573955 ADAM9Q13443 819 aa17.53■□□□□ 0.4
USP43-204ENST00000573955 ZNF280CQ8ND82 737 aa17.53■□□□□ 0.4
USP43-204ENST00000573955 ERGIC2Q96RQ1 377 aa17.53■□□□□ 0.4
USP43-204ENST00000573955 TRIM10Q9UDY6 481 aa17.53■□□□□ 0.4
USP43-204ENST00000573955 SAMM50Q9Y512 469 aa17.53■□□□□ 0.4
USP43-204ENST00000573955 VWA5AO00534 786 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 ZBED4O75132 1171 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 NDUFA10O95299 355 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 ZC3H12AQ5D1E8 599 aaKnown RBP17.52■□□□□ 0.4
USP43-204ENST00000573955 MAEAQ7L5Y9 396 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 MCF2L2Q86YR7 1114 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 KSR1Q8IVT5 923 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 FAM210AQ96ND0 272 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 SH2D3AQ9BRG2 576 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 LXNQ9BS40 222 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 CRACR2AQ9BSW2 395 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 SLC24A3Q9HC58 644 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 EPN1Q9Y6I3 576 aaPredicted RBP17.52■□□□□ 0.4
USP43-204ENST00000573955 ERLIN2O94905 339 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 HNRNPH1P31943 449 aaKnown RBP17.52■□□□□ 0.4
USP43-204ENST00000573955 USP14P54578 494 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 MRPS9P82933 396 aaKnown RBP17.52■□□□□ 0.4
USP43-204ENST00000573955 APBA1Q02410 837 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 ZNF569Q5MCW4 686 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 CC2D1AQ6P1N0 951 aaPredicted RBP17.52■□□□□ 0.4
USP43-204ENST00000573955 FMNL3Q8IVF7 1028 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 GPC2Q8N158 579 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 MYCT1Q8N699 235 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 ZNF513Q8N8E2 541 aaPredicted RBP17.52■□□□□ 0.4
USP43-204ENST00000573955 NUP58Q9BVL2 599 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 TUFT1Q9NNX1 390 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 SIK3Q9Y2K2 1263 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 STK24Q9Y6E0 443 aa17.52■□□□□ 0.4
USP43-204ENST00000573955 TUBB4AP04350 444 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 NR2F2P24468 414 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 NMT1P30419 496 aaKnown RBP17.51■□□□□ 0.39
USP43-204ENST00000573955 HOXD13P35453 343 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 MOB2Q70IA6 237 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 APOBEC3FQ8IUX4 373 aaKnown RBP17.51■□□□□ 0.39
USP43-204ENST00000573955 FAM107BQ9H098 131 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 REXO2Q9Y3B8 237 aaKnown RBP17.51■□□□□ 0.39
USP43-204ENST00000573955 CENPFP49454 3210 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 PEX10O60683 326 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 FAM13AO94988 1023 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 PLEKP08567 350 aaPredicted RBP17.51■□□□□ 0.39
USP43-204ENST00000573955 ZBED6P86452 979 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 TKFCQ3LXA3 575 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 RNF207Q6ZRF8 634 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 ZNHIT6Q9NWK9 470 aaKnown RBP17.51■□□□□ 0.39
USP43-204ENST00000573955 CLIC2O15247 247 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 KIF5CO60282 957 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 ITGB3BPQ13352 177 aaPredicted RBP17.51■□□□□ 0.39
USP43-204ENST00000573955 MTMR1Q13613 665 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 ZC2HC1CQ53FD0 456 aaPredicted RBP17.51■□□□□ 0.39
USP43-204ENST00000573955 MIER3Q7Z3K6 550 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 RMDN3Q96TC7 470 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 CARD6Q9BX69 1037 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 RNF146Q9NTX7 359 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 VPS18Q9P253 973 aa17.51■□□□□ 0.39
USP43-204ENST00000573955 RPTORQ8N122 1335 aa17.5■□□□□ 0.39
USP43-204ENST00000573955 ELF1P32519 619 aa17.5■□□□□ 0.39
USP43-204ENST00000573955 KNOP1Q1ED39 458 aaKnown RBP17.5■□□□□ 0.39
USP43-204ENST00000573955 AS3MTQ9HBK9 375 aa17.5■□□□□ 0.39
USP43-204ENST00000573955 ARFGAP3Q9NP61 516 aa17.5■□□□□ 0.39
USP43-204ENST00000573955 TESPA1A2RU30 521 aaPredicted RBP17.5■□□□□ 0.39
USP43-204ENST00000573955 ANKRD33BA6NCL7 494 aa17.5■□□□□ 0.39
USP43-204ENST00000573955 PGM5Q15124 567 aa17.5■□□□□ 0.39
USP43-204ENST00000573955 GPR162Q16538 588 aa17.5■□□□□ 0.39
USP43-204ENST00000573955 SNRNP48Q6IEG0 339 aaKnown RBP17.5■□□□□ 0.39
USP43-204ENST00000573955 C1orf186Q6ZWK4 172 aa17.5■□□□□ 0.39
USP43-204ENST00000573955 RRAGAQ7L523 313 aa17.5■□□□□ 0.39
USP43-204ENST00000573955 KRT26Q7Z3Y9 468 aa17.5■□□□□ 0.39
USP43-204ENST00000573955 RETREG2Q8NC44 543 aa17.5■□□□□ 0.39
USP43-204ENST00000573955 NHEJ1Q9H9Q4 299 aaPredicted RBP17.5■□□□□ 0.39
USP43-204ENST00000573955 NLRC4Q9NPP4 1024 aa17.5■□□□□ 0.39
USP43-204ENST00000573955 GUCA1BQ9UMX6 200 aa17.5■□□□□ 0.39
USP43-204ENST00000573955 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.5■□□□□ 0.39
USP43-204ENST00000573955 DOCK1Q14185 1865 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 IPO7O95373 1038 aaKnown RBP17.49■□□□□ 0.39
USP43-204ENST00000573955 CYP27A1Q02318 531 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 BAATQ14032 418 aaPredicted RBP17.49■□□□□ 0.39
USP43-204ENST00000573955 NEDD9Q14511 834 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms