RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 UBLCP1Q8WVY7 318 aaPredicted RBP17.06■□□□□ 0.32
NUP88-207ENST00000573584 SIX2Q9NPC8 291 aa17.06■□□□□ 0.32
NUP88-207ENST00000573584 GCNT4Q9P109 453 aa17.06■□□□□ 0.32
NUP88-207ENST00000573584 SUCLA2Q9P2R7 463 aaPredicted RBP17.06■□□□□ 0.32
NUP88-207ENST00000573584 FBXL5Q9UKA1 691 aa17.06■□□□□ 0.32
NUP88-207ENST00000573584 DDX3XO00571 662 aaKnown RBP eCLIP17.05■□□□□ 0.322e-6■■■■■ 31.8
NUP88-207ENST00000573584 DAPK3O43293 454 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 SLURP2P0DP57 97 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 FLT3P36888 993 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 JAM2P57087 298 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 ODF2Q5BJF6 829 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 FAM182BQ5T319 152 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 RNF187Q5TA31 235 aaPredicted RBP17.05■□□□□ 0.32
NUP88-207ENST00000573584 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 SYCE1Q8N0S2 351 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 PRPF38AQ8NAV1 312 aaKnown RBP17.05■□□□□ 0.32
NUP88-207ENST00000573584 SLC35C1Q96A29 364 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 MXD3Q9BW11 206 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 TYW1Q9NV66 732 aaKnown RBP17.05■□□□□ 0.32
NUP88-207ENST00000573584 SRRM3A6NNA2 597 aaPredicted RBP17.05■□□□□ 0.32
NUP88-207ENST00000573584 MEIS2O14770 477 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 RIMBP2O15034 1052 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 FNTAP49354 379 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 MCTP2Q6DN12 878 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 CNPY4Q8N129 248 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 CCDC26Q8TAB7 109 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 U2AF1L4Q8WU68 220 aaKnown RBP17.05■□□□□ 0.32
NUP88-207ENST00000573584 NENFQ9UMX5 172 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 STXBP5LQ9Y2K9 1186 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 PCDHB13Q9Y5F0 798 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 MYO3BQ8WXR4 1341 aa17.05■□□□□ 0.32
NUP88-207ENST00000573584 A0A0A6YYK5 440 aaPredicted RBP17.04■□□□□ 0.32
NUP88-207ENST00000573584 RSPH10B2B2RC85 870 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 BHMG1C9JSJ3 638 aaPredicted RBP17.04■□□□□ 0.32
NUP88-207ENST00000573584 CLIC2O15247 247 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 FSBPO95073 299 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 RSPH10BP0C881 870 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 BIRC3Q13489 604 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 KCNV1Q6PIU1 500 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 MOXD1Q6UVY6 613 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 NT5DC3Q86UY8 548 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 RASGEF1CQ8N431 466 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 ATAD5Q96QE3 1844 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 MYO1FO00160 1098 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 GFPT2O94808 682 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 GCNT3O95395 438 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 IFT88Q13099 833 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 SLITRK6Q9H5Y7 841 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 INTUQ9ULD6 942 aa17.04■□□□□ 0.32
NUP88-207ENST00000573584 SLC16A3O15427 465 aaKnown RBP17.03■□□□□ 0.32
NUP88-207ENST00000573584 TTI1O43156 1089 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 HLA-DOAP06340 250 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 USP8P40818 1118 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 CYP4A11Q02928 519 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 KCNA1Q09470 495 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 AP3B2Q13367 1082 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 MTMR3Q13615 1198 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 P2RX7Q99572 595 aaKnown RBP17.03■□□□□ 0.32
NUP88-207ENST00000573584 BHMT2Q9H2M3 363 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 BCAS3Q9H6U6 928 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 ASTN1O14525 1302 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 MYH4Q9Y623 1939 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 MNAT1P51948 309 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 GALCP54803 685 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 HES6Q96HZ4 224 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 CEP89Q96ST8 783 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 SLC12A6Q9UHW9 1150 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 GMNCA6NCL1 334 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 TBX3O15119 743 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 TBCAO75347 108 aaKnown RBP17.03■□□□□ 0.32
NUP88-207ENST00000573584 FERP16591 822 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 SCNN1DP51172 638 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 NPEPPSP55786 919 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 BMT2Q1RMZ1 405 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 CERS5Q8N5B7 392 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 CRYGNQ8WXF5 182 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 CYFIP2Q96F07 1278 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 CELF4Q9BZC1 486 aaKnown RBP17.03■□□□□ 0.32
NUP88-207ENST00000573584 GGA2Q9UJY4 613 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 AMFRQ9UKV5 643 aa17.03■□□□□ 0.32
NUP88-207ENST00000573584 UTP11Q9Y3A2 253 aaKnown RBP17.03■□□□□ 0.32
NUP88-207ENST00000573584 TMOD1P28289 359 aa17.02■□□□□ 0.32
NUP88-207ENST00000573584 STAT1P42224 750 aa17.02■□□□□ 0.32
NUP88-207ENST00000573584 Q4G0T1 1027 aa17.02■□□□□ 0.32
NUP88-207ENST00000573584 RUSC1Q9BVN2 902 aa17.02■□□□□ 0.32
NUP88-207ENST00000573584 ATP8B3O60423 1300 aa17.02■□□□□ 0.32
NUP88-207ENST00000573584 ARFGEF1Q9Y6D6 1849 aa17.02■□□□□ 0.32
NUP88-207ENST00000573584 FAM86B1E9PN63 330 aa17.02■□□□□ 0.31
NUP88-207ENST00000573584 FAM86B2P0C5J1 330 aa17.02■□□□□ 0.31
NUP88-207ENST00000573584 DHX9Q08211 1270 aaKnown RBP17.02■□□□□ 0.31
NUP88-207ENST00000573584 SLFN13Q68D06 897 aa17.02■□□□□ 0.31
NUP88-207ENST00000573584 TMC3Q7Z5M5 1100 aa17.02■□□□□ 0.31
NUP88-207ENST00000573584 LENG9Q96B70 501 aa17.02■□□□□ 0.31
NUP88-207ENST00000573584 DPH5Q9H2P9 285 aa17.02■□□□□ 0.31
NUP88-207ENST00000573584 OSGEPQ9NPF4 335 aa17.02■□□□□ 0.31
NUP88-207ENST00000573584 NOVA2Q9UNW9 492 aaKnown RBP17.02■□□□□ 0.31
NUP88-207ENST00000573584 GTPBP10A4D1E9 387 aaKnown RBP17.01■□□□□ 0.31
NUP88-207ENST00000573584 SFI1A8K8P3 1242 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 EVI5O60447 810 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 FGGP02679 453 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms