RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 PCNX4Q63HM2 1172 aa9.34□□□□□ -0.91
NPLOC4-211ENST00000573212 XRRA1Q6P2D8 792 aa9.34□□□□□ -0.91
NPLOC4-211ENST00000573212 HOMER1Q86YM7 354 aa9.34□□□□□ -0.91
NPLOC4-211ENST00000573212 DNAJB3Q8WWF6 145 aa9.34□□□□□ -0.91
NPLOC4-211ENST00000573212 SEPT1Q8WYJ6 367 aa9.34□□□□□ -0.91
NPLOC4-211ENST00000573212 SNX27Q96L92 541 aa9.34□□□□□ -0.91
NPLOC4-211ENST00000573212 IL25Q9H293 177 aa9.34□□□□□ -0.91
NPLOC4-211ENST00000573212 VRTNQ9H8Y1 702 aa9.34□□□□□ -0.91
NPLOC4-211ENST00000573212 SENP2Q9HC62 589 aa9.34□□□□□ -0.91
NPLOC4-211ENST00000573212 RABGEF1Q9UJ41 708 aa9.34□□□□□ -0.91
NPLOC4-211ENST00000573212 ZNF215Q9UL58 517 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-211ENST00000573212 MICAL3Q7RTP6 2002 aa9.34□□□□□ -0.91
NPLOC4-211ENST00000573212 TMEM221A6NGB7 291 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 M0R296 226 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 HIP1O00291 1037 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 PIK3CDO00329 1044 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 KCNA2P16389 499 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 TCF7P36402 384 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 PTPN5P54829 565 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 USP17L6PQ6QN14 398 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 TSHZ1Q6ZSZ6 1077 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 ADGRD2Q7Z7M1 963 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 RSPH3Q86UC2 560 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 CHD1LQ86WJ1 897 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 CMTR2Q8IYT2 770 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 KLHL23Q8NBE8 558 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 SMRP1Q8NCR6 262 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 GIMAP8Q8ND71 665 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 ATP8B4Q8TF62 1192 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 POF1BQ8WVV4 589 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 PCYT2Q99447 389 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 PRRX2Q99811 253 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 CDY2AQ9Y6F7 541 aa9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 MRPL42Q9Y6G3 142 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-211ENST00000573212 MYO7AQ13402 2215 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 ZNF318Q5VUA4 2279 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 MAFGO15525 162 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 ST18O60284 1047 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 GLP2RO95838 553 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 INSRRP14616 1297 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 SMARCA1P28370 1054 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 CD52P31358 61 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 NUCB1Q02818 461 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 PPFIA1Q13136 1202 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 KCNC3Q14003 757 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 GRIK4Q16099 956 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 NLRX1Q86UT6 975 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 NPAS4Q8IUM7 802 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 FBXL6Q8N531 539 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 IGDCC4Q8TDY8 1250 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 SUSD6Q92537 303 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 GPRASP2Q96D09 838 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 MAP3K14Q99558 947 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 PHF7Q9BWX1 381 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 FTHL17Q9BXU8 183 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 SLC4A5Q9BY07 1137 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 SMARCAD1Q9H4L7 1026 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 DIAPH3Q9NSV4 1193 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 ERAP1Q9NZ08 941 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 PADI3Q9ULW8 664 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 UBIAD1Q9Y5Z9 338 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 MYH7BA7E2Y1 1941 aa9.32□□□□□ -0.92
NPLOC4-211ENST00000573212 TECTAO75443 2155 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 RRN3P2A6NIE6 340 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 IFIT3O14879 490 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 ATP9BO43861 1147 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 IGHDP01880 384 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 RPLP2P05387 115 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 CYP21A2P08686 494 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 ATF7P17544 494 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 ITGB5P18084 799 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 RBM25P49756 843 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 NDUFV1P49821 464 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 MRPS6P82932 125 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 SP4Q02446 784 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 IER5Q5VY09 327 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 B4GALNT3Q6L9W6 998 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 TMEM184AQ6ZMB5 413 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 FAM43BQ6ZT52 329 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 SND1Q7KZF4 910 aaKnown RBP eCLIP9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 PPP2R3CQ969Q6 453 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 ASIC4Q96FT7 647 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 SPZ1Q9BXG8 430 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 S1PR5Q9H228 398 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 TUBE1Q9UJT0 475 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 USP15Q9Y4E8 981 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 KDM3AQ9Y4C1 1321 aa9.31□□□□□ -0.92
NPLOC4-211ENST00000573212 CFHP08603 1231 aa9.3□□□□□ -0.92
NPLOC4-211ENST00000573212 STAG3L1P0CL83 205 aa9.3□□□□□ -0.92
NPLOC4-211ENST00000573212 AVPR2P30518 371 aa9.3□□□□□ -0.92
NPLOC4-211ENST00000573212 NRIP1P48552 1158 aa9.3□□□□□ -0.92
NPLOC4-211ENST00000573212 ANTXR2P58335 489 aa9.3□□□□□ -0.92
NPLOC4-211ENST00000573212 ERVFC1P60507 584 aa9.3□□□□□ -0.92
NPLOC4-211ENST00000573212 FAM189BP81408 668 aa9.3□□□□□ -0.92
NPLOC4-211ENST00000573212 UBE3AQ05086 875 aa9.3□□□□□ -0.92
NPLOC4-211ENST00000573212 SIGLEC14Q08ET2 396 aa9.3□□□□□ -0.92
NPLOC4-211ENST00000573212 TRDNQ13061 729 aa9.3□□□□□ -0.92
NPLOC4-211ENST00000573212 AAMPQ13685 434 aa9.3□□□□□ -0.92
NPLOC4-211ENST00000573212 DESI1Q6ICB0 168 aa9.3□□□□□ -0.92
NPLOC4-211ENST00000573212 RBM23Q86U06 439 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms