RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 PPP4R3AQ6IN85 833 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 PSRC1Q6PGN9 363 aaPredicted RBP8.77□□□□□ -1.01
SMG6-211ENST00000572369 POTEBQ6S5H4 581 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 ABHD15Q6UXT9 468 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 PLPPR4Q7Z2D5 763 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 DEFB128Q7Z7B8 93 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 RSPH3Q86UC2 560 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 FAM178BQ8IXR5 827 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 FBXO18Q8NFZ0 1043 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 AFAP1L1Q8TED9 768 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 SLC5A5Q92911 643 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 GJA10Q969M2 543 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 LENG9Q96B70 501 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 WNT8AQ9H1J5 351 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 MTIF3Q9H2K0 278 aaKnown RBP8.77□□□□□ -1.01
SMG6-211ENST00000572369 IL23AQ9NPF7 189 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 DISC1Q9NRI5 854 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 NOL7Q9UMY1 257 aaKnown RBP8.77□□□□□ -1.01
SMG6-211ENST00000572369 PTPRZ1P23471 2315 aaPredicted RBP8.77□□□□□ -1.01
SMG6-211ENST00000572369 DMXL1Q9Y485 3027 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 RRN3P2A6NIE6 340 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 ZBBXA8MT70 800 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 HBP1O60381 514 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 PSMD10O75832 226 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 HSP90AA1P07900 732 aaKnown RBP8.76□□□□□ -1.01
SMG6-211ENST00000572369 CKBP12277 381 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 ACTN1P12814 892 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 INSRRP14616 1297 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 SELPP16109 830 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 MCM7P33993 719 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 PLCB4Q15147 1175 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 CALCRLQ16602 461 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 ST3GAL2Q16842 350 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 LARP1BQ659C4 914 aaKnown RBP8.76□□□□□ -1.01
SMG6-211ENST00000572369 LRRC8DQ7L1W4 858 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 SERINC5Q86VE9 423 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 POTEDQ86YR6 584 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 CCDC60Q8IWA6 550 aaPredicted RBP8.76□□□□□ -1.01
SMG6-211ENST00000572369 SLFN12Q8IYM2 578 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 LMBR1Q8WVP7 490 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 FAM20AQ96MK3 541 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 PCYT2Q99447 389 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.76□□□□□ -1.018e-7■■■■■ 32.7
SMG6-211ENST00000572369 NKX2-4Q9H2Z4 354 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 FOXP1Q9H334 677 aaPredicted RBP8.76□□□□□ -1.01
SMG6-211ENST00000572369 UNC45AQ9H3U1 944 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 SLC28A3Q9HAS3 691 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 GABBR1Q9UBS5 961 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 MSRAQ9UJ68 235 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 TUBE1Q9UJT0 475 aa8.76□□□□□ -1.01
SMG6-211ENST00000572369 RALYQ9UKM9 306 aaKnown RBP8.76□□□□□ -1.01
SMG6-211ENST00000572369 COL4A6Q14031 1691 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 FASNP49327 2511 aaKnown RBP8.75□□□□□ -1.01
SMG6-211ENST00000572369 RSPH10B2B2RC85 870 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 K7ELQ4 463 aaPredicted RBP8.75□□□□□ -1.01
SMG6-211ENST00000572369 M0QZ92 97 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 TBX3O15119 743 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 EDIL3O43854 480 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 NEMFO60524 1076 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 PARNO95453 639 aaKnown RBP8.75□□□□□ -1.01
SMG6-211ENST00000572369 PFKMP08237 780 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 CTSHP09668 335 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 IQCF3P0C7M6 154 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 RSPH10BP0C881 870 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 RFC2P35250 354 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 TXKP42681 527 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 HIC1Q14526 733 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 ZNF618Q5T7W0 954 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 NCAPH2Q6IBW4 605 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 TAF2Q6P1X5 1199 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 ZNF365Q70YC5 407 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 OTOP2Q7RTS6 562 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 ASCL5Q7RTU5 278 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 NOSTRINQ8IVI9 506 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 HSCBQ8IWL3 235 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 RDM1Q8NG50 284 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 ETNPPLQ8TBG4 499 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 TRAPPC12Q8WVT3 735 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 BBXQ8WY36 941 aaPredicted RBP8.75□□□□□ -1.01
SMG6-211ENST00000572369 DHX38Q92620 1227 aaKnown RBP8.75□□□□□ -1.01
SMG6-211ENST00000572369 TNFRSF25Q93038 417 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 FAM167AQ96KS9 214 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 MBOAT7Q96N66 472 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 NRBP2Q9NSY0 501 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 FOXD4L1Q9NU39 408 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 PCDHA12Q9UN75 941 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 MTCH2Q9Y6C9 303 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 USP24Q9UPU5 2620 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 EVPLQ92817 2033 aa8.75□□□□□ -1.01
SMG6-211ENST00000572369 PLXNA3P51805 1871 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 IGKV6D-21A0A0A0MT36 114 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 VPS37CA5D8V6 355 aaPredicted RBP8.74□□□□□ -1.01
SMG6-211ENST00000572369 GTPBP6O43824 516 aaPredicted RBP8.74□□□□□ -1.01
SMG6-211ENST00000572369 DKC1O60832 514 aaKnown RBP eCLIP8.74□□□□□ -1.01
SMG6-211ENST00000572369 POU3F3P20264 500 aaPredicted RBP8.74□□□□□ -1.01
SMG6-211ENST00000572369 PDCP20941 246 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 KLRC1P26715 233 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 PRKCEQ02156 737 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 ZNF174Q15697 407 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 ZNF484Q5JVG2 852 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms