RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 FAM117BQ6P1L5 589 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 RTN4RL1Q86UN2 441 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 LRRC71Q8N4P6 559 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 LINC01465Q8N7H1 131 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 ZNF579Q8NAF0 562 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 FAM184AQ8NB25 1140 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 RDM1Q8NG50 284 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 PHOSPHO2Q8TCD6 241 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 TNPO1Q92973 898 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 CELF4Q9BZC1 486 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 TCEAL9Q9UHQ7 104 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 MSRAQ9UJ68 235 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 PCDHA11Q9Y5I1 949 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 TRPV2Q9Y5S1 764 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 COL1A2P08123 1366 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 CHD9Q3L8U1 2897 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 RFXAPO00287 272 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 ZBTB39O15060 712 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 TBX3O15119 743 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 VTNP04004 478 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 CA3P07451 260 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 CD52P31358 61 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 KCNJ6P48051 423 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 CLCN3P51790 818 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 DRP2Q13474 957 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 NBR1Q14596 966 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 ZNF174Q15697 407 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 RAB30Q15771 203 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 TMEM266Q2M3C6 531 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 EFCAB12Q6NXP0 572 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 RSPH3Q86UC2 560 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 TMEM40Q8WWA1 233 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 LINC01599Q8WXQ3 324 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 SEPT8Q92599 483 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 ZNF668Q96K58 619 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 MTMR9Q96QG7 549 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 NIFKQ9BYG3 293 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 IFIH1Q9BYX4 1025 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 FOXP1Q9H334 677 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 PRDM12Q9H4Q4 367 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 CERS4Q9HA82 394 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 NRBP2Q9NSY0 501 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 RGL1Q9NZL6 768 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 STXBP5LQ9Y2K9 1186 aa11.52□□□□□ -0.57
GTF3C1-213ENST00000571886 TMEM265A0A087WTH1 108 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 A0A087WWV3 80 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 EPOPA6NHQ4 379 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 DDX11L8A8MPP1 907 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 ENPP3O14638 875 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 MARCH6O60337 910 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 GPR32O75388 356 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 GJB2P29033 226 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 MCM7P33993 719 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 TXKP42681 527 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 TOB1P50616 345 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 NPEPPSP55786 919 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 PSMC5P62195 406 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 TAP1Q03518 808 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 ADGRE1Q14246 886 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 CTTNQ14247 550 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 EPHA7Q15375 998 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 SAFBQ15424 915 aaKnown RBP eCLIP11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 CALCRLQ16602 461 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 MTERF2Q49AM1 385 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 IER5Q5VY09 327 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 PLA2G4FQ68DD2 849 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 NCAPH2Q6IBW4 605 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 TSHZ1Q6ZSZ6 1077 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 ANO5Q75V66 913 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 MYOCDQ8IZQ8 938 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 NME8Q8N427 588 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 METTL13Q8N6R0 699 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 DYDC2Q96IM9 177 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 NAP1L4Q99733 375 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 SLC28A3Q9HAS3 691 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 SEPT9Q9UHD8 586 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 GINS2Q9Y248 185 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 COL6A3P12111 3177 aa11.51□□□□□ -0.57
GTF3C1-213ENST00000571886 TTC3P53804 2025 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 TLL1O43897 1013 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 NEMFO60524 1076 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 SLITRK3O94933 977 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 UPP2O95045 317 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 GJB5O95377 273 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 BAG4O95429 457 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 P4HBP07237 508 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 U2AF2P26368 475 aaKnown RBP eCLIP11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 QARSP47897 775 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 CYP4A11Q02928 519 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 KIZQ2M2Z5 673 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 XKR3Q5GH77 459 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 PPP2R2DQ66LE6 453 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 SLFN12Q8IYM2 578 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 C4orf32Q8N8J7 132 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 TOP1MTQ969P6 601 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 FAM167AQ96KS9 214 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 OSMRQ99650 979 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 ADAMTS10Q9H324 1103 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 TMX1Q9H3N1 280 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 TTC12Q9H892 705 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms