RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 C4orf19Q8IY42 314 aa9.76□□□□□ -0.85
TRAPPC1-203ENST00000571739 RPUSD2Q8IZ73 545 aaKnown RBP9.76□□□□□ -0.85
TRAPPC1-203ENST00000571739 CCDC155Q8N6L0 562 aa9.76□□□□□ -0.85
TRAPPC1-203ENST00000571739 LINC01465Q8N7H1 131 aa9.76□□□□□ -0.85
TRAPPC1-203ENST00000571739 HERVK_113Q902F9 699 aa9.76□□□□□ -0.85
TRAPPC1-203ENST00000571739 FAM167AQ96KS9 214 aa9.76□□□□□ -0.85
TRAPPC1-203ENST00000571739 FAM49AQ9H0Q0 323 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC1-203ENST00000571739 CDHR5Q9HBB8 845 aa9.76□□□□□ -0.85
TRAPPC1-203ENST00000571739 CXXC1Q9P0U4 656 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC1-203ENST00000571739 COL1A2P08123 1366 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 EVPLQ92817 2033 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 IGKV6-21A0A0C4DH24 114 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 MAGEB2O15479 319 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 CAND2O75155 1236 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 MED24O75448 989 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 LYPLA2O95372 231 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 RFC2P35250 354 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 FXR2P51116 673 aaKnown RBP eCLIP9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 NPEPPSP55786 919 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 ATP2C1P98194 919 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 TMEM62Q0P6H9 643 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 DRP2Q13474 957 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 PKP1Q13835 747 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 LRIT3Q3SXY7 679 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 MTERF2Q49AM1 385 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 PLA2G4FQ68DD2 849 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 EFCAB12Q6NXP0 572 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 BRAPQ7Z569 592 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 NME8Q8N427 588 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 IGSF22Q8N9C0 903 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 LXNQ9BS40 222 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 ZSWIM4Q9H7M6 989 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 CEP131Q9UPN4 1083 aa9.75□□□□□ -0.85
TRAPPC1-203ENST00000571739 LAD1O00515 517 aa9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 MAFO75444 373 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 PARNO95453 639 aaKnown RBP9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 CDC25AP30304 524 aa9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 YWHABP31946 246 aaKnown RBP9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 PRPHP41219 470 aa9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 FXR1P51114 621 aaKnown RBP eCLIP9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 CLCN3P51790 818 aa9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 PTPAQ15257 358 aa9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 SF3A1Q15459 793 aaKnown RBP9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 PLEKHG4Q58EX7 1191 aa9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 FAM109BQ6ICB4 259 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 LRRC71Q8N4P6 559 aa9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 METTL13Q8N6R0 699 aa9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 DBF4BQ8NFT6 615 aa9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 MMTAG2Q9BU76 263 aaKnown RBP9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 POLR3CQ9BUI4 534 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 CELF4Q9BZC1 486 aaKnown RBP9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 FTOQ9C0B1 505 aaKnown RBP eCLIP9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 AGO3Q9H9G7 860 aaKnown RBP9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 SUGCTQ9HAC7 445 aa9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 CYP26B1Q9NR63 512 aa9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 SEPT9Q9UHD8 586 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 CLIC4Q9Y696 253 aa9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 CDY2AQ9Y6F7 541 aa9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 CEP290O15078 2479 aa9.74□□□□□ -0.85
TRAPPC1-203ENST00000571739 PP2D1A8MPX8 630 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 GRXCR1A8MXD5 290 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 DKC1O60832 514 aaKnown RBP eCLIP9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 GPR32O75388 356 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 VTNP04004 478 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 HSP90AA1P07900 732 aaKnown RBP9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 PFKMP08237 780 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 XRCC6P12956 609 aaKnown RBP eCLIP9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 RPA1P27694 616 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 MRPS6P82932 125 aaKnown RBP9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 GRIN1Q05586 938 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 TBC1D8BQ0IIM8 1120 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 LPIN1Q14693 890 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 FBXO47Q5MNV8 452 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 IER5Q5VY09 327 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 PSRC1Q6PGN9 363 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 DTHD1Q6ZMT9 781 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 RSPH3Q86UC2 560 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 RTN4RL1Q86UN2 441 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 PIGOQ8TEQ8 1089 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 TMEM40Q8WWA1 233 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 LRCH3Q96II8 777 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 CEP170P1Q96L14 293 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 RNPC3Q96LT9 517 aaKnown RBP9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 ADAMTS10Q9H324 1103 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 ZSCAN16Q9H4T2 348 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 TUFT1Q9NNX1 390 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 LRWD1Q9UFC0 647 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 ZDHHC9Q9Y397 364 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 KDM3AQ9Y4C1 1321 aa9.73□□□□□ -0.85
TRAPPC1-203ENST00000571739 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 GHRP10912 638 aa9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 RARRES1P49788 294 aa9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 NLRP11P59045 1033 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 CEBPZQ03701 1054 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 TMEM266Q2M3C6 531 aa9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 XKR9Q5GH70 373 aa9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 FOXD4L5Q5VV16 416 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 ARL6IP4Q66PJ3 421 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 CNKSR3Q6P9H4 555 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms